Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC010323.2-201ENST00000596405 594 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC103724.4-201ENST00000605981 292 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 CR769775.3-201ENST00000610388 219 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 RBM22P4-201ENST00000613117 1240 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 LAMTOR5-AS1-236ENST00000626261 464 ntTSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AL356481.2-201ENST00000629902 528 ntTSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AF001550.2-201ENST00000636643 217 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 LINC01835-203ENST00000639800 567 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 OR2A20P-201ENST00000479887 2913 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC006600.2-201ENST00000624834 2506 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 SLC10A5P1-201ENST00000379063 1306 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 MRRFP1-201ENST00000435941 1675 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 PHF2P2-202ENST00000444553 2865 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 IL15-202ENST00000320650 1447 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 OR10G7-201ENST00000330487 936 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 MIR1306-201ENST00000408439 85 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 RPL21P108-201ENST00000413857 481 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 GAPDHP73-201ENST00000423411 1007 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC093084.1-201ENST00000424233 687 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 HSPE1P16-201ENST00000426640 348 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AL022313.3-201ENST00000433970 405 ntTSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC122718.1-201ENST00000439448 744 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AP000350.3-201ENST00000440099 289 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 HMGB1P16-201ENST00000447155 540 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC003666.1-201ENST00000454113 611 ntTSL 3 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AL603882.1-201ENST00000463059 681 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 FAM133DP-201ENST00000464802 691 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC004924.1-201ENST00000480160 781 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 RPL36P16-201ENST00000496996 306 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 HNRNPA1P44-201ENST00000503999 879 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 LINC02116-201ENST00000509455 493 ntTSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 ATP1B1P1-201ENST00000509767 915 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 BTG4P1-201ENST00000510421 183 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 ADH1C-204ENST00000515683 1740 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 IGHVIII-67-3-201ENST00000517650 232 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC113191.1-201ENST00000517759 403 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 IGHVIII-51-1-201ENST00000519403 302 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC083923.1-201ENST00000523708 376 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 RASA4-217ENST00000538869 483 ntTSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC084757.1-201ENST00000559987 490 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 RN7SL138P-201ENST00000577405 287 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC004147.5-201ENST00000581727 536 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 MIR4266-201ENST00000583300 55 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 LINC01764-201ENST00000587970 380 ntTSL 4 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AP002360.3-201ENST00000607673 710 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AL590491.1-202ENST00000618038 394 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC022140.2-201ENST00000623500 188 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC011483.4-201ENST00000623621 585 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AC025048.6-202ENST00000627667 438 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AP001206.1-201ENST00000635554 720 ntBASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms