Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NR1H2P55055 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NR1H2P55055 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NR1H2P55055 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NR1H2P55055 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 AKAP17BP-201ENST00000431706 2719 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 RNU1-16P-201ENST00000365477 164 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 MIR498-201ENST00000385134 124 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.7□□□□□ -1.34
NR1H2P55055 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.7□□□□□ -1.34
NR1H2P55055 PPIAP30-201ENST00000415473 519 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NR1H2P55055 PSMC1P2-201ENST00000423961 1204 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 AL512637.1-201ENST00000439523 1231 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 AL591379.2-201ENST00000450223 397 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.7□□□□□ -1.34
NR1H2P55055 RN7SL36P-201ENST00000469345 276 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 SEPT7P6-201ENST00000469999 1143 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 RN7SL58P-201ENST00000473445 294 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 RPS14P7-201ENST00000473701 448 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 DNM1P31-201ENST00000564149 696 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.7□□□□□ -1.34
NR1H2P55055 AC011193.2-201ENST00000582638 367 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NR1H2P55055 AC073488.8-201ENST00000631952 757 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.7□□□□□ -1.34
NR1H2P55055 AL591848.4-201ENST00000567832 3472 ntBASIC6.7□□□□□ -1.34
NR1H2P55055 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NR1H2P55055 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NR1H2P55055 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
NR1H2P55055 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.7□□□□□ -1.34
NR1H2P55055 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.7□□□□□ -1.34
NR1H2P55055 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NR1H2P55055 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NR1H2P55055 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 OFD1P17-201ENST00000437639 3018 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 AC090771.1-201ENST00000585803 1618 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
NR1H2P55055 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.69□□□□□ -1.34
NR1H2P55055 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NR1H2P55055 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NR1H2P55055 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NR1H2P55055 AC007068.1-201ENST00000396690 844 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.69□□□□□ -1.34
NR1H2P55055 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.69□□□□□ -1.34
NR1H2P55055 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC6.69□□□□□ -1.34
NR1H2P55055 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.69□□□□□ -1.34
NR1H2P55055 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 RPS14P8-201ENST00000478778 369 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 RPL17P2-201ENST00000491913 451 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 AC073648.3-201ENST00000504939 925 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.69□□□□□ -1.34
NR1H2P55055 RNA5SP96-201ENST00000516041 107 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 AC100823.2-201ENST00000518337 699 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.69□□□□□ -1.34
NR1H2P55055 AP004607.5-201ENST00000532034 217 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 OR7E87P-201ENST00000532397 929 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.69□□□□□ -1.34
NR1H2P55055 AL132640.2-202ENST00000559732 614 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 AC012181.2-201ENST00000570210 699 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC6.69□□□□□ -1.34
NR1H2P55055 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.69□□□□□ -1.34
NR1H2P55055 AC245128.3-201ENST00000594721 748 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC6.69□□□□□ -1.34
NR1H2P55055 AL353807.4-201ENST00000604995 257 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 AF117829.2-201ENST00000619538 361 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 BX005040.2-201ENST00000620504 370 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 AP001885.1-201ENST00000621658 558 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 AC241377.2-202ENST00000636462 997 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.69□□□□□ -1.34
NR1H2P55055 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.69□□□□□ -1.34
NR1H2P55055 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC6.69□□□□□ -1.34
NR1H2P55055 AL033543.1-201ENST00000623440 13454 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.69□□□□□ -1.34
NR1H2P55055 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
NR1H2P55055 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC6.69□□□□□ -1.34
NR1H2P55055 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 AC005618.1-201ENST00000606901 3148 ntBASIC6.69□□□□□ -1.34
NR1H2P55055 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
NR1H2P55055 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NR1H2P55055 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms