Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC7.2□□□□□ -1.26
LHX1P48742 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX1P48742 RN7SL270P-201ENST00000579643 281 ntBASIC7.2□□□□□ -1.26
LHX1P48742 RN7SL66P-201ENST00000582099 264 ntBASIC7.2□□□□□ -1.26
LHX1P48742 AC024267.2-201ENST00000582737 417 ntBASIC7.2□□□□□ -1.26
LHX1P48742 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.2□□□□□ -1.26
LHX1P48742 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.2□□□□□ -1.26
LHX1P48742 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.2□□□□□ -1.26
LHX1P48742 MIR6885-201ENST00000612241 66 ntBASIC7.2□□□□□ -1.26
LHX1P48742 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LHX1P48742 AC244100.4-201ENST00000617747 388 ntBASIC7.2□□□□□ -1.26
LHX1P48742 MIR8089-201ENST00000620165 82 ntBASIC7.2□□□□□ -1.26
LHX1P48742 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
LHX1P48742 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX1P48742 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX1P48742 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LHX1P48742 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.2□□□□□ -1.26
LHX1P48742 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
LHX1P48742 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX1P48742 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX1P48742 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX1P48742 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.2□□□□□ -1.26
LHX1P48742 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.2□□□□□ -1.26
LHX1P48742 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 RNA5SP321-201ENST00000362722 111 ntBASIC7.19□□□□□ -1.26
LHX1P48742 AL590635.1-201ENST00000406314 586 ntBASIC7.19□□□□□ -1.26
LHX1P48742 RPEP4-201ENST00000437636 602 ntBASIC7.19□□□□□ -1.26
LHX1P48742 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 AKR1D1P1-201ENST00000457236 936 ntBASIC7.19□□□□□ -1.26
LHX1P48742 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 AC099340.1-201ENST00000475247 599 ntBASIC7.19□□□□□ -1.26
LHX1P48742 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC7.19□□□□□ -1.26
LHX1P48742 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.19□□□□□ -1.26
LHX1P48742 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.19□□□□□ -1.26
LHX1P48742 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.19□□□□□ -1.26
LHX1P48742 AC091133.5-201ENST00000603088 301 ntBASIC7.19□□□□□ -1.26
LHX1P48742 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.19□□□□□ -1.26
LHX1P48742 AC010333.3-201ENST00000615100 402 ntBASIC7.19□□□□□ -1.26
LHX1P48742 HTR1DP1-201ENST00000616500 888 ntBASIC7.19□□□□□ -1.26
LHX1P48742 MIR7854-201ENST00000620068 65 ntBASIC7.19□□□□□ -1.26
LHX1P48742 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
LHX1P48742 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
LHX1P48742 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
LHX1P48742 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.19□□□□□ -1.26
LHX1P48742 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LHX1P48742 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.18□□□□□ -1.26
LHX1P48742 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LHX1P48742 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
LHX1P48742 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LHX1P48742 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.18□□□□□ -1.26
LHX1P48742 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.18□□□□□ -1.26
LHX1P48742 AC084782.1-201ENST00000564401 2465 ntBASIC7.18□□□□□ -1.26
LHX1P48742 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
LHX1P48742 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
LHX1P48742 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LHX1P48742 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LHX1P48742 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
LHX1P48742 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.18□□□□□ -1.26
LHX1P48742 RPL26P30-201ENST00000453533 435 ntBASIC7.18□□□□□ -1.26
LHX1P48742 RN7SL393P-201ENST00000463588 296 ntBASIC7.18□□□□□ -1.26
LHX1P48742 AC090142.2-201ENST00000483263 416 ntBASIC7.18□□□□□ -1.26
LHX1P48742 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
LHX1P48742 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.18□□□□□ -1.26
LHX1P48742 AL390198.2-201ENST00000510553 222 ntBASIC7.18□□□□□ -1.26
LHX1P48742 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.18□□□□□ -1.26
LHX1P48742 AL445383.1-201ENST00000554689 874 ntBASIC7.18□□□□□ -1.26
LHX1P48742 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.18□□□□□ -1.26
LHX1P48742 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LHX1P48742 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms