Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.43□□□□□ -1.38
SOX3P41225 AC122713.2-201ENST00000624942 3335 ntBASIC6.43□□□□□ -1.38
SOX3P41225 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX3P41225 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX3P41225 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.43□□□□□ -1.38
SOX3P41225 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX3P41225 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX3P41225 AL359263.1-201ENST00000441188 2796 ntBASIC6.43□□□□□ -1.38
SOX3P41225 CLCA3P-203ENST00000490028 2781 ntBASIC6.43□□□□□ -1.38
SOX3P41225 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX3P41225 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX3P41225 RNA5SP176-201ENST00000390956 110 ntBASIC6.43□□□□□ -1.38
SOX3P41225 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX3P41225 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX3P41225 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX3P41225 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX3P41225 LSM3P3-201ENST00000436601 306 ntBASIC6.43□□□□□ -1.38
SOX3P41225 MYL6P3-201ENST00000436904 432 ntBASIC6.43□□□□□ -1.38
SOX3P41225 AL096803.1-201ENST00000456921 1021 ntBASIC6.43□□□□□ -1.38
SOX3P41225 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.43□□□□□ -1.38
SOX3P41225 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.43□□□□□ -1.38
SOX3P41225 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX3P41225 IGLC4-201ENST00000517690 248 ntBASIC6.43□□□□□ -1.38
SOX3P41225 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.43□□□□□ -1.38
SOX3P41225 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX3P41225 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX3P41225 AP002004.1-206ENST00000532441 876 ntBASIC6.43□□□□□ -1.38
SOX3P41225 AL132640.1-201ENST00000559594 619 ntBASIC6.43□□□□□ -1.38
SOX3P41225 AC023827.2-201ENST00000566880 1061 ntBASIC6.43□□□□□ -1.38
SOX3P41225 AC233699.1-201ENST00000569955 1168 ntBASIC6.43□□□□□ -1.38
SOX3P41225 ACTG1P15-201ENST00000570019 1063 ntBASIC6.43□□□□□ -1.38
SOX3P41225 RN7SL32P-201ENST00000580514 281 ntBASIC6.43□□□□□ -1.38
SOX3P41225 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.43□□□□□ -1.38
SOX3P41225 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX3P41225 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX3P41225 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX3P41225 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX3P41225 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX3P41225 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX3P41225 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX3P41225 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX3P41225 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX3P41225 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX3P41225 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX3P41225 ASNSP6-201ENST00000592770 1618 ntBASIC6.43□□□□□ -1.38
SOX3P41225 AL359195.2-201ENST00000623657 4412 ntBASIC6.43□□□□□ -1.38
SOX3P41225 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
SOX3P41225 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX3P41225 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX3P41225 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
SOX3P41225 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
SOX3P41225 AC102941.1-201ENST00000567616 1537 ntBASIC6.42□□□□□ -1.38
SOX3P41225 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX3P41225 RPL18AP14-201ENST00000417685 526 ntBASIC6.42□□□□□ -1.38
SOX3P41225 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX3P41225 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX3P41225 E2F6P1-201ENST00000428850 745 ntBASIC6.42□□□□□ -1.38
SOX3P41225 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX3P41225 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX3P41225 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX3P41225 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX3P41225 AL845321.1-201ENST00000444603 348 ntBASIC6.42□□□□□ -1.38
SOX3P41225 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX3P41225 AC133965.1-201ENST00000452984 354 ntBASIC6.42□□□□□ -1.38
SOX3P41225 PSMA6P2-201ENST00000457574 686 ntBASIC6.42□□□□□ -1.38
SOX3P41225 RN7SL492P-201ENST00000460700 295 ntBASIC6.42□□□□□ -1.38
SOX3P41225 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 PPP1R2P6-201ENST00000478565 588 ntBASIC6.42□□□□□ -1.38
SOX3P41225 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX3P41225 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SOX3P41225 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX3P41225 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX3P41225 AC010287.1-201ENST00000566916 357 ntBASIC6.42□□□□□ -1.38
SOX3P41225 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX3P41225 MIR4312-201ENST00000579909 76 ntBASIC6.42□□□□□ -1.38
SOX3P41225 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX3P41225 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX3P41225 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX3P41225 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX3P41225 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.42□□□□□ -1.38
SOX3P41225 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 AP005212.3-201ENST00000619964 528 ntBASIC6.42□□□□□ -1.38
SOX3P41225 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX3P41225 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 ATP5BP1-201ENST00000411980 1574 ntBASIC6.42□□□□□ -1.38
SOX3P41225 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX3P41225 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX3P41225 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX3P41225 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms