Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.45□□□□□ -1.38
COL5A1P20908 AL162632.2-201ENST00000553933 399 ntBASIC6.45□□□□□ -1.38
COL5A1P20908 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.45□□□□□ -1.38
COL5A1P20908 MIR3614-201ENST00000581261 86 ntBASIC6.45□□□□□ -1.38
COL5A1P20908 GTF2IP6-201ENST00000583143 541 ntBASIC6.45□□□□□ -1.38
COL5A1P20908 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.45□□□□□ -1.38
COL5A1P20908 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.45□□□□□ -1.38
COL5A1P20908 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.45□□□□□ -1.38
COL5A1P20908 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.45□□□□□ -1.38
COL5A1P20908 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.45□□□□□ -1.38
COL5A1P20908 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL5A1P20908 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.45□□□□□ -1.38
COL5A1P20908 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
COL5A1P20908 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL5A1P20908 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL5A1P20908 PSMC1P6-201ENST00000477233 1319 ntBASIC6.45□□□□□ -1.38
COL5A1P20908 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
COL5A1P20908 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.45□□□□□ -1.38
COL5A1P20908 AC062029.1-202ENST00000606164 3651 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC6.44□□□□□ -1.38
COL5A1P20908 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.44□□□□□ -1.38
COL5A1P20908 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC6.44□□□□□ -1.38
COL5A1P20908 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC6.44□□□□□ -1.38
COL5A1P20908 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 MTCO1P11-201ENST00000429111 1528 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.44□□□□□ -1.38
COL5A1P20908 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.44□□□□□ -1.38
COL5A1P20908 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 AL590762.1-201ENST00000391782 432 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 YWHAZP4-201ENST00000392459 708 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AL512422.1-201ENST00000407033 553 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.44□□□□□ -1.38
COL5A1P20908 BMS1P13-201ENST00000417301 885 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AC009500.1-201ENST00000420684 583 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.44□□□□□ -1.38
COL5A1P20908 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
COL5A1P20908 BRWD1P3-201ENST00000428816 390 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.44□□□□□ -1.38
COL5A1P20908 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.44□□□□□ -1.38
COL5A1P20908 BMS1P10-201ENST00000443754 1120 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 RN7SL254P-201ENST00000460609 284 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AC068228.1-201ENST00000461723 211 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.44□□□□□ -1.38
COL5A1P20908 OR4A21P-201ENST00000532759 944 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.44□□□□□ -1.38
COL5A1P20908 AC002519.2-203ENST00000567043 837 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.44□□□□□ -1.38
COL5A1P20908 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.44□□□□□ -1.38
COL5A1P20908 AC024884.1-201ENST00000620583 399 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AC034229.6-201ENST00000623704 224 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.44□□□□□ -1.38
COL5A1P20908 BRD7P1-201ENST00000557705 1915 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COL5A1P20908 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.44□□□□□ -1.38
COL5A1P20908 AL023806.3-201ENST00000638502 2704 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COL5A1P20908 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COL5A1P20908 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 AC007938.1-201ENST00000562524 2902 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.44□□□□□ -1.38
COL5A1P20908 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
COL5A1P20908 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 AC009237.3-203ENST00000442128 3551 ntBASIC6.44□□□□□ -1.38
COL5A1P20908 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL5A1P20908 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A1P20908 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A1P20908 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A1P20908 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A1P20908 RANP6-201ENST00000413691 644 ntBASIC6.43□□□□□ -1.38
COL5A1P20908 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.43□□□□□ -1.38
COL5A1P20908 AC083862.1-201ENST00000427378 1242 ntBASIC6.43□□□□□ -1.38
COL5A1P20908 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL5A1P20908 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.43□□□□□ -1.38
COL5A1P20908 AC135721.2-201ENST00000464237 300 ntBASIC6.43□□□□□ -1.38
COL5A1P20908 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.43□□□□□ -1.38
COL5A1P20908 RPS10P20-201ENST00000494130 463 ntBASIC6.43□□□□□ -1.38
COL5A1P20908 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A1P20908 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.43□□□□□ -1.38
COL5A1P20908 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.43□□□□□ -1.38
COL5A1P20908 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.43□□□□□ -1.38
COL5A1P20908 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms