Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LIG1P18858 OR52B5P-204ENST00000641744 3467 ntBASIC8.45□□□□□ -1.06
LIG1P18858 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.45□□□□□ -1.06
LIG1P18858 SPATA31C1-201ENST00000420021 3895 ntBASIC8.45□□□□□ -1.06
LIG1P18858 NCOA4P3-201ENST00000513203 1877 ntBASIC8.45□□□□□ -1.06
LIG1P18858 UG0898H09-202ENST00000623646 7040 ntBASIC8.45□□□□□ -1.06
LIG1P18858 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
LIG1P18858 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.45□□□□□ -1.06
LIG1P18858 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
LIG1P18858 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
LIG1P18858 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
LIG1P18858 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LIG1P18858 RN7SKP225-201ENST00000410405 352 ntBASIC8.45□□□□□ -1.06
LIG1P18858 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC8.45□□□□□ -1.06
LIG1P18858 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.45□□□□□ -1.06
LIG1P18858 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC8.45□□□□□ -1.06
LIG1P18858 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
LIG1P18858 AC108039.2-201ENST00000440214 359 ntBASIC8.45□□□□□ -1.06
LIG1P18858 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 FO393419.1-201ENST00000443746 355 ntBASIC8.45□□□□□ -1.06
LIG1P18858 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 RSU1P1-201ENST00000453416 441 ntBASIC8.45□□□□□ -1.06
LIG1P18858 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.45□□□□□ -1.06
LIG1P18858 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC8.45□□□□□ -1.06
LIG1P18858 AC055733.3-201ENST00000505214 523 ntBASIC8.45□□□□□ -1.06
LIG1P18858 AC091435.1-201ENST00000505442 584 ntBASIC8.45□□□□□ -1.06
LIG1P18858 NAMPTP2-201ENST00000505629 1115 ntBASIC8.45□□□□□ -1.06
LIG1P18858 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC8.45□□□□□ -1.06
LIG1P18858 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC8.45□□□□□ -1.06
LIG1P18858 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
LIG1P18858 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC8.45□□□□□ -1.06
LIG1P18858 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.45□□□□□ -1.06
LIG1P18858 AC100823.2-201ENST00000518337 699 ntBASIC8.45□□□□□ -1.06
LIG1P18858 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.45□□□□□ -1.06
LIG1P18858 CHCHD3P2-201ENST00000550751 639 ntBASIC8.45□□□□□ -1.06
LIG1P18858 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC8.45□□□□□ -1.06
LIG1P18858 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC8.45□□□□□ -1.06
LIG1P18858 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8.45□□□□□ -1.06
LIG1P18858 AC090415.1-201ENST00000581877 847 ntBASIC8.45□□□□□ -1.06
LIG1P18858 STARD6-204ENST00000584040 660 ntTSL 3 BASIC8.45□□□□□ -1.06
LIG1P18858 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.45□□□□□ -1.06
LIG1P18858 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC8.45□□□□□ -1.06
LIG1P18858 AC025171.4-201ENST00000607250 1047 ntBASIC8.45□□□□□ -1.06
LIG1P18858 AC004477.3-201ENST00000614061 590 ntBASIC8.45□□□□□ -1.06
LIG1P18858 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
LIG1P18858 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC8.45□□□□□ -1.06
LIG1P18858 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.45□□□□□ -1.06
LIG1P18858 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
LIG1P18858 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LIG1P18858 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LIG1P18858 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 PRNCR1-201ENST00000635449 12727 ntBASIC8.45□□□□□ -1.06
LIG1P18858 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
LIG1P18858 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LIG1P18858 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LIG1P18858 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
LIG1P18858 AC061975.7-201ENST00000592016 2692 ntBASIC8.44□□□□□ -1.06
LIG1P18858 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LIG1P18858 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LIG1P18858 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LIG1P18858 RPL22P22-201ENST00000395439 379 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC8.44□□□□□ -1.06
LIG1P18858 AC023141.1-201ENST00000419418 379 ntBASIC8.44□□□□□ -1.06
LIG1P18858 CLCN3P1-201ENST00000423965 1017 ntBASIC8.44□□□□□ -1.06
LIG1P18858 RBMY2JP-201ENST00000425544 1059 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AC009299.1-201ENST00000429684 717 ntBASIC8.44□□□□□ -1.06
LIG1P18858 DDX11L10-201ENST00000430178 571 ntBASIC8.44□□□□□ -1.06
LIG1P18858 NAP1L4P3-201ENST00000432820 1147 ntBASIC8.44□□□□□ -1.06
LIG1P18858 MORF4L1P5-201ENST00000433352 961 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AC000362.1-201ENST00000433725 425 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.44□□□□□ -1.06
LIG1P18858 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC8.44□□□□□ -1.06
LIG1P18858 AL009048.1-201ENST00000450437 298 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AC015820.1-201ENST00000473882 321 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AP000563.1-201ENST00000490865 758 ntBASIC8.44□□□□□ -1.06
LIG1P18858 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.44□□□□□ -1.06
LIG1P18858 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.44□□□□□ -1.06
LIG1P18858 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC8.44□□□□□ -1.06
LIG1P18858 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC8.44□□□□□ -1.06
LIG1P18858 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC8.44□□□□□ -1.06
LIG1P18858 SNX18P27-201ENST00000523611 779 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AP003385.2-201ENST00000524910 973 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.44□□□□□ -1.06
LIG1P18858 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC8.44□□□□□ -1.06
LIG1P18858 DCN-207ENST00000546370 586 ntTSL 3 BASIC8.44□□□□□ -1.06
LIG1P18858 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.44□□□□□ -1.06
LIG1P18858 AC092368.2-201ENST00000565911 600 ntBASIC8.44□□□□□ -1.06
LIG1P18858 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
LIG1P18858 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC8.44□□□□□ -1.06
LIG1P18858 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC8.44□□□□□ -1.06
LIG1P18858 MIR4509-3-201ENST00000578671 94 ntBASIC8.44□□□□□ -1.06
LIG1P18858 MIR5192-201ENST00000579892 92 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms