Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RPL7L1P5-201ENST00000590816 738 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC022001.1-201ENST00000605193 268 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AL662797.3-201ENST00000607476 773 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AP005137.2-201ENST00000609238 400 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AL034428.1-202ENST00000613736 625 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 Metazoa_SRP.44-201ENST00000615037 294 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC007342.8-201ENST00000623278 678 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 CR848007.1-201ENST00000442354 1699 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC073349.2-201ENST00000427545 1603 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 OFD1P15Y-201ENST00000411536 1392 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 MEST-203ENST00000378576 2180 ntTSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 BTG4-201ENST00000356018 1018 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 Y_RNA.18-201ENST00000362461 102 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 RNU6-543P-201ENST00000362576 108 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 RNY3P10-201ENST00000384764 102 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 MIR25-201ENST00000384816 84 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 TRAV20-201ENST00000390448 406 ntAPPRIS P1 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 RAD51B-201ENST00000390683 922 ntTSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 HIST1H2BPS2-201ENST00000402707 340 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 RPL23AP39-201ENST00000415533 405 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC016831.2-201ENST00000417179 352 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 MTND1P2-201ENST00000430604 821 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 DNAJA1P6-201ENST00000437347 354 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC010967.3-201ENST00000438648 213 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AL671855.1-201ENST00000446875 1203 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AL445189.2-201ENST00000447543 259 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 LINC01696-201ENST00000448988 492 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 RFC5P1-201ENST00000454419 874 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC072039.1-201ENST00000477611 581 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 GAPDHP39-201ENST00000481866 979 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 OR4G11P-201ENST00000492842 939 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC017013.1-201ENST00000506459 799 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AL645949.1-201ENST00000510094 324 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC090159.1-201ENST00000525309 806 ntTSL 2 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC090625.2-201ENST00000534165 518 ntTSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 SLC25A51P2-201ENST00000535708 889 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC092325.1-201ENST00000566449 554 ntBASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC118754.2-201ENST00000574133 537 ntTSL 4 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC8□□□□□ -1.13
DEPDC4Q8N2C3 AC013290.1-201ENST00000586960 537 ntBASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms