Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RN7SKP148-201ENST00000410179 275 ntBASIC7.57□□□□□ -1.2
TPM4P67936 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.57□□□□□ -1.2
TPM4P67936 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.57□□□□□ -1.2
TPM4P67936 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.57□□□□□ -1.2
TPM4P67936 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TPM4P67936 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.57□□□□□ -1.2
TPM4P67936 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 MYL6P4-201ENST00000477911 453 ntBASIC7.57□□□□□ -1.2
TPM4P67936 RPL34P29-201ENST00000491411 325 ntBASIC7.57□□□□□ -1.2
TPM4P67936 RN7SL608P-201ENST00000492377 279 ntBASIC7.57□□□□□ -1.2
TPM4P67936 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC7.57□□□□□ -1.2
TPM4P67936 ADI1P2-201ENST00000514945 429 ntBASIC7.57□□□□□ -1.2
TPM4P67936 KCTD9P4-201ENST00000526766 1166 ntBASIC7.57□□□□□ -1.2
TPM4P67936 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
TPM4P67936 SIGLEC31P-201ENST00000594237 551 ntBASIC7.57□□□□□ -1.2
TPM4P67936 AL352984.2-201ENST00000611153 546 ntBASIC7.57□□□□□ -1.2
TPM4P67936 AP003789.1-201ENST00000617737 605 ntBASIC7.57□□□□□ -1.2
TPM4P67936 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 FGL2-202ENST00000637771 989 ntBASIC7.57□□□□□ -1.2
TPM4P67936 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.57□□□□□ -1.2
TPM4P67936 AL451064.2-201ENST00000623514 1654 ntBASIC7.57□□□□□ -1.2
TPM4P67936 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TPM4P67936 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TPM4P67936 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.56□□□□□ -1.2
TPM4P67936 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
TPM4P67936 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.56□□□□□ -1.2
TPM4P67936 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
TPM4P67936 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
TPM4P67936 SNORA70H-201ENST00000383910 135 ntBASIC7.56□□□□□ -1.2
TPM4P67936 SNORA70J-201ENST00000384182 135 ntBASIC7.56□□□□□ -1.2
TPM4P67936 AL034372.1-201ENST00000407586 754 ntBASIC7.56□□□□□ -1.2
TPM4P67936 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.56□□□□□ -1.2
TPM4P67936 EIF4A1P13-201ENST00000415667 230 ntBASIC7.56□□□□□ -1.2
TPM4P67936 AL663061.1-201ENST00000416625 580 ntBASIC7.56□□□□□ -1.2
TPM4P67936 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.56□□□□□ -1.2
TPM4P67936 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.56□□□□□ -1.2
TPM4P67936 AL139415.1-201ENST00000424862 352 ntBASIC7.56□□□□□ -1.2
TPM4P67936 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 SULT1D1P-201ENST00000458020 882 ntBASIC7.56□□□□□ -1.2
TPM4P67936 RN7SL213P-201ENST00000463482 317 ntBASIC7.56□□□□□ -1.2
TPM4P67936 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
TPM4P67936 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC7.56□□□□□ -1.2
TPM4P67936 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.56□□□□□ -1.2
TPM4P67936 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.56□□□□□ -1.2
TPM4P67936 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.56□□□□□ -1.2
TPM4P67936 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
TPM4P67936 RN7SL697P-201ENST00000582484 299 ntBASIC7.56□□□□□ -1.2
TPM4P67936 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC7.56□□□□□ -1.2
TPM4P67936 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.56□□□□□ -1.2
TPM4P67936 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
TPM4P67936 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TPM4P67936 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 CCDC150P1-201ENST00000537123 2215 ntBASIC7.56□□□□□ -1.2
TPM4P67936 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.56□□□□□ -1.2
TPM4P67936 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
TPM4P67936 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM4P67936 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TPM4P67936 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.55□□□□□ -1.2
TPM4P67936 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TPM4P67936 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
TPM4P67936 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM4P67936 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TPM4P67936 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.55□□□□□ -1.2
TPM4P67936 TTC41P-205ENST00000551270 3963 ntBASIC7.55□□□□□ -1.2
TPM4P67936 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM4P67936 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TPM4P67936 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM4P67936 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
TPM4P67936 FAUP2-201ENST00000394301 401 ntBASIC7.55□□□□□ -1.2
TPM4P67936 IFNA12P-201ENST00000413147 571 ntBASIC7.55□□□□□ -1.2
TPM4P67936 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.55□□□□□ -1.2
TPM4P67936 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM4P67936 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.55□□□□□ -1.2
TPM4P67936 RPL21P33-201ENST00000444831 484 ntBASIC7.55□□□□□ -1.2
TPM4P67936 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
TPM4P67936 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.55□□□□□ -1.2
TPM4P67936 OR7E102P-201ENST00000448855 1015 ntBASIC7.55□□□□□ -1.2
TPM4P67936 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms