Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.92□□□□□ -1.3
LIMK2P53671 BMS1P11-201ENST00000442351 885 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 BX005266.3-201ENST00000443013 1075 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIMK2P53671 CEACAMP11-201ENST00000455211 583 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 BMS1P9-201ENST00000457640 885 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 AP000805.1-201ENST00000471604 784 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 AL591122.1-201ENST00000487348 492 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.92□□□□□ -1.3
LIMK2P53671 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.92□□□□□ -1.3
LIMK2P53671 AC021220.1-201ENST00000507445 630 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.92□□□□□ -1.3
LIMK2P53671 AC011352.2-201ENST00000514574 1016 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.92□□□□□ -1.3
LIMK2P53671 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.92□□□□□ -1.3
LIMK2P53671 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.92□□□□□ -1.3
LIMK2P53671 AC131935.1-201ENST00000524621 333 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.92□□□□□ -1.3
LIMK2P53671 AP006587.5-201ENST00000532033 739 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 AC092375.1-201ENST00000550410 637 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 AC089984.3-201ENST00000552838 363 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 AL135978.1-201ENST00000553618 1266 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.92□□□□□ -1.3
LIMK2P53671 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.92□□□□□ -1.3
LIMK2P53671 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.92□□□□□ -1.3
LIMK2P53671 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.92□□□□□ -1.3
LIMK2P53671 AC005479.3-201ENST00000602790 431 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMK2P53671 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMK2P53671 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMK2P53671 HSPD1P1-201ENST00000503199 1726 ntBASIC6.92□□□□□ -1.3
LIMK2P53671 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMK2P53671 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.92□□□□□ -1.3
LIMK2P53671 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMK2P53671 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.91□□□□□ -1.3
LIMK2P53671 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 PABPC1P8-201ENST00000452851 2086 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
LIMK2P53671 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.91□□□□□ -1.3
LIMK2P53671 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.91□□□□□ -1.3
LIMK2P53671 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 AC062029.1-202ENST00000606164 3651 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 OR2A3P-202ENST00000641249 1776 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 RN7SKP118-201ENST00000364331 330 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 RN7SKP55-201ENST00000364888 307 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 MIR187-201ENST00000385062 109 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.91□□□□□ -1.3
LIMK2P53671 RNA5SP280-201ENST00000411230 115 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMK2P53671 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMK2P53671 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.91□□□□□ -1.3
LIMK2P53671 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMK2P53671 SUMO2P8-201ENST00000434672 286 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 AL022324.2-201ENST00000434827 780 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 AC013403.1-201ENST00000436954 263 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMK2P53671 PPIAP32-201ENST00000449940 472 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 AC063943.2-201ENST00000495697 534 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMK2P53671 AC100854.1-201ENST00000520351 341 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMK2P53671 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMK2P53671 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.91□□□□□ -1.3
LIMK2P53671 OR5M6P-201ENST00000530227 937 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMK2P53671 AL513218.1-201ENST00000606527 391 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 HTR1DP1-201ENST00000616500 888 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.91□□□□□ -1.3
LIMK2P53671 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.91□□□□□ -1.3
LIMK2P53671 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.91□□□□□ -1.3
LIMK2P53671 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.91□□□□□ -1.3
LIMK2P53671 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.91□□□□□ -1.3
LIMK2P53671 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMK2P53671 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIMK2P53671 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.9□□□□□ -1.3
LIMK2P53671 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LIMK2P53671 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIMK2P53671 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIMK2P53671 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIMK2P53671 AC009220.2-201ENST00000489759 1751 ntBASIC6.9□□□□□ -1.3
LIMK2P53671 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIMK2P53671 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms