Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL079303.1-201ENST00000486611 463 ntBASIC7.22□□□□□ -1.25
APOEP02649 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.22□□□□□ -1.25
APOEP02649 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.22□□□□□ -1.25
APOEP02649 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.22□□□□□ -1.25
APOEP02649 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.22□□□□□ -1.25
APOEP02649 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.22□□□□□ -1.25
APOEP02649 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.22□□□□□ -1.25
APOEP02649 AC111186.1-201ENST00000604684 130 ntBASIC7.22□□□□□ -1.25
APOEP02649 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.22□□□□□ -1.25
APOEP02649 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC7.22□□□□□ -1.25
APOEP02649 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.22□□□□□ -1.25
APOEP02649 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.22□□□□□ -1.25
APOEP02649 AC010168.2-201ENST00000562691 5428 ntBASIC7.22□□□□□ -1.25
APOEP02649 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.22□□□□□ -1.25
APOEP02649 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.22□□□□□ -1.25
APOEP02649 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.22□□□□□ -1.25
APOEP02649 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.21□□□□□ -1.25
APOEP02649 AP002800.1-201ENST00000624982 2225 ntBASIC7.21□□□□□ -1.25
APOEP02649 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
APOEP02649 HSPD1P1-201ENST00000503199 1726 ntBASIC7.21□□□□□ -1.25
APOEP02649 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.21□□□□□ -1.25
APOEP02649 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
APOEP02649 ATP5BP1-201ENST00000411980 1574 ntBASIC7.21□□□□□ -1.25
APOEP02649 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.21□□□□□ -1.25
APOEP02649 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
APOEP02649 LPAL2-203ENST00000454031 2498 ntBASIC7.21□□□□□ -1.25
APOEP02649 AC126474.2-201ENST00000623268 1750 ntBASIC7.21□□□□□ -1.25
APOEP02649 AL031651.1-201ENST00000615357 1438 ntBASIC7.21□□□□□ -1.25
APOEP02649 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.21□□□□□ -1.26
APOEP02649 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.21□□□□□ -1.26
APOEP02649 OR10D1P-201ENST00000355343 936 ntBASIC7.21□□□□□ -1.26
APOEP02649 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
APOEP02649 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
APOEP02649 AL136100.1-201ENST00000407696 330 ntBASIC7.21□□□□□ -1.26
APOEP02649 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.21□□□□□ -1.26
APOEP02649 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
APOEP02649 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC7.21□□□□□ -1.26
APOEP02649 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.21□□□□□ -1.26
APOEP02649 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
APOEP02649 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.21□□□□□ -1.26
APOEP02649 AC135721.2-201ENST00000464237 300 ntBASIC7.21□□□□□ -1.26
APOEP02649 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.21□□□□□ -1.26
APOEP02649 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.21□□□□□ -1.26
APOEP02649 AC093325.1-201ENST00000508378 326 ntBASIC7.21□□□□□ -1.26
APOEP02649 AC008868.1-201ENST00000509786 737 ntBASIC7.21□□□□□ -1.26
APOEP02649 AC106800.2-201ENST00000514009 1103 ntBASIC7.21□□□□□ -1.26
APOEP02649 EEF1B2P2-201ENST00000519625 676 ntBASIC7.21□□□□□ -1.26
APOEP02649 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.21□□□□□ -1.26
APOEP02649 NXPE2P1-201ENST00000543705 726 ntBASIC7.21□□□□□ -1.26
APOEP02649 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.21□□□□□ -1.26
APOEP02649 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC7.21□□□□□ -1.26
APOEP02649 AL132640.1-201ENST00000559594 619 ntBASIC7.21□□□□□ -1.26
APOEP02649 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.21□□□□□ -1.26
APOEP02649 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.21□□□□□ -1.26
APOEP02649 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.21□□□□□ -1.26
APOEP02649 AP002345.2-201ENST00000609961 904 ntBASIC7.21□□□□□ -1.26
APOEP02649 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.21□□□□□ -1.26
APOEP02649 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
APOEP02649 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
APOEP02649 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
APOEP02649 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.21□□□□□ -1.26
APOEP02649 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.21□□□□□ -1.26
APOEP02649 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.21□□□□□ -1.26
APOEP02649 BRD7P6-201ENST00000431406 1860 ntBASIC7.21□□□□□ -1.26
APOEP02649 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
APOEP02649 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.21□□□□□ -1.26
APOEP02649 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.21□□□□□ -1.26
APOEP02649 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
APOEP02649 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
APOEP02649 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
APOEP02649 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
APOEP02649 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.2□□□□□ -1.26
APOEP02649 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.2□□□□□ -1.26
APOEP02649 AC097634.1-201ENST00000604491 2467 ntBASIC7.2□□□□□ -1.26
APOEP02649 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
APOEP02649 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
APOEP02649 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.2□□□□□ -1.26
APOEP02649 RNA5SP176-201ENST00000390956 110 ntBASIC7.2□□□□□ -1.26
APOEP02649 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.2□□□□□ -1.26
APOEP02649 RPL36P18-201ENST00000419316 318 ntBASIC7.2□□□□□ -1.26
APOEP02649 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.2□□□□□ -1.26
APOEP02649 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.2□□□□□ -1.26
APOEP02649 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.2□□□□□ -1.26
APOEP02649 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.2□□□□□ -1.26
APOEP02649 AC115223.1-201ENST00000466377 870 ntBASIC7.2□□□□□ -1.26
APOEP02649 AC026254.2-201ENST00000475295 371 ntBASIC7.2□□□□□ -1.26
APOEP02649 PPP1R2P6-201ENST00000478565 588 ntBASIC7.2□□□□□ -1.26
APOEP02649 MTCO1P55-201ENST00000489829 745 ntBASIC7.2□□□□□ -1.26
APOEP02649 AC026826.1-201ENST00000493002 361 ntBASIC7.2□□□□□ -1.26
APOEP02649 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.2□□□□□ -1.26
APOEP02649 AC017007.1-201ENST00000511960 415 ntBASIC7.2□□□□□ -1.26
APOEP02649 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.2□□□□□ -1.26
APOEP02649 PHBP2-201ENST00000532859 806 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms