Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP000916.1-201ENST00000533869 835 ntBASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 AC079031.2-201ENST00000537742 615 ntBASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 NDFIP1P1-201ENST00000543144 525 ntBASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 TPRKBP2-201ENST00000565969 475 ntBASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 DYM-207ENST00000578396 755 ntTSL 3 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 RPL10P15-201ENST00000585756 315 ntBASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 AC091805.2-201ENST00000603848 235 ntBASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 AL356986.1-201ENST00000604085 341 ntBASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 AL354760.1-201ENST00000608357 643 ntBASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 SMG7-216ENST00000638826 219 ntTSL 2 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 AC012467.2-201ENST00000607783 2583 ntBASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CUEDC1Q9NWM3 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 HSPD1P5-201ENST00000511127 1720 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC093909.5-201ENST00000621839 1799 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC008033.1-201ENST00000216407 1162 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 RN7SKP239-201ENST00000364814 295 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AL356968.2-201ENST00000412769 1257 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 ELOBP4-201ENST00000423418 296 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 VN1R35P-201ENST00000428102 693 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AL354941.1-201ENST00000438600 464 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 COX6CP2-201ENST00000444980 225 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 PDCL3P4-201ENST00000489621 720 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 RN7SL434P-201ENST00000495872 271 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 GUSBP3-201ENST00000509348 423 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC024589.1-201ENST00000512207 263 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 SETP21-201ENST00000514799 892 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 RNA5SP422-201ENST00000516778 111 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 FABP5P7-201ENST00000524732 405 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC025252.2-201ENST00000537470 502 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 NMNAT1P5-201ENST00000559657 841 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC087639.1-201ENST00000560974 920 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC007346.1-201ENST00000569208 867 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 MTND1P15-201ENST00000579262 949 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AL117336.2-201ENST00000602435 335 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 Z98200.1-201ENST00000607298 470 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 MIR6751-201ENST00000610479 63 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AL136221.1-201ENST00000621449 509 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 DUXAP9-208ENST00000622815 614 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AC090617.9-201ENST00000623751 147 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms