Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 RNU6-666P-201ENST00000363499 107 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 RNA5SP185-201ENST00000390963 114 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 RNU2-5P-201ENST00000410533 180 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 RNA5SP498-201ENST00000411342 120 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 TMA16P2-201ENST00000413187 601 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC011753.4-201ENST00000417974 311 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 SETP8-201ENST00000435341 628 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 OR51B8P-201ENST00000449892 769 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 MTCYBP35-201ENST00000503630 1137 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC006070.1-201ENST00000508151 193 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC026700.1-201ENST00000512074 544 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 MTATP6P15-201ENST00000527233 835 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 LDHC-204ENST00000536880 957 ntTSL 5 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 UBE2Q2P11-201ENST00000559691 205 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC009097.3-201ENST00000563557 1018 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 GARSP1-201ENST00000570895 719 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 MTND3P13-201ENST00000574391 343 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC008536.1-201ENST00000602872 669 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC007262.1-201ENST00000604099 321 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC087623.4-201ENST00000606593 695 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC231759.1-201ENST00000616455 597 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC096708.4-201ENST00000620563 552 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC011815.3-201ENST00000624194 473 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC012557.3-201ENST00000626439 255 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AC016582.3-206ENST00000636547 207 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 AL008638.3-201ENST00000623027 5182 ntBASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRAIPQ9BWF2 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AC004862.1-209ENST00000437763 1678 ntTSL 5 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 TUBBP10-201ENST00000427668 1301 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 OR9K2-201ENST00000305377 1122 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 RNU4-28P-201ENST00000364739 141 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 CD2-201ENST00000369477 478 ntTSL 2 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 SNORD116-12-201ENST00000384468 92 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AC092638.1-201ENST00000411966 1275 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 LINC01066-201ENST00000415283 399 ntTSL 3 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 OR2X1P-201ENST00000421144 687 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 HIGD1AP4-201ENST00000430194 280 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AC000362.1-201ENST00000433725 425 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 GAPDHP32-201ENST00000433816 998 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 HMGB3P10-201ENST00000434734 572 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AL512882.1-201ENST00000436086 832 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 PTGES3P1-201ENST00000439531 483 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AC016908.1-201ENST00000442571 1219 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AL136454.1-201ENST00000443181 466 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 RPL7P14-201ENST00000449851 741 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 PCMTD1P3-201ENST00000451824 472 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AC131392.1-201ENST00000506490 633 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AC138866.2-201ENST00000508650 584 ntBASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC8.59□□□□□ -1.03
TRAIPQ9BWF2 GUSBP9-201ENST00000510138 584 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms