Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC115223.1-201ENST00000466377 870 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 RN7SL456P-201ENST00000469290 295 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 OR4A21P-201ENST00000532759 944 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 PDCL3P1-201ENST00000534575 734 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AL031429.2-201ENST00000602605 649 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC024085.1-201ENST00000604299 432 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC026951.2-201ENST00000613847 241 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC007993.1-201ENST00000621298 2430 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AP000641.1-201ENST00000531988 1639 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AL359195.2-201ENST00000623657 4412 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 RN7SKP148-201ENST00000410179 275 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 RNA5SP280-201ENST00000411230 115 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AL662791.3-201ENST00000413771 776 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 ELOBP4-201ENST00000423418 296 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 RPS4XP19-201ENST00000460237 736 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 PGBD4P1-201ENST00000473644 407 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC025271.1-201ENST00000485045 429 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC096743.1-201ENST00000485172 319 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 ABCA11P-202ENST00000504019 2110 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC095057.1-201ENST00000507583 168 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 IGLVV-66-201ENST00000523818 341 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 FAM30C-201ENST00000561158 410 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 RN7SL366P-201ENST00000577957 292 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC099777.1-201ENST00000603779 1070 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AL139317.4-201ENST00000605879 760 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AP005212.3-201ENST00000619964 528 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AL118508.4-201ENST00000624142 1176 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC087269.2-201ENST00000641764 975 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 OGFOD1P1-201ENST00000447552 1592 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 AC129502.1-201ENST00000623261 1654 ntBASIC7.83□□□□□ -1.16
CDK5RAP3Q96JB5 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CDK5RAP3Q96JB5 AP002800.1-201ENST00000624982 2225 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms