Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AP001372.1-202ENST00000533008 344 ntTSL 3 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 COX7B2-204ENST00000543208 587 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 RPS3AP4-201ENST00000555161 764 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 DYNLL1P3-201ENST00000596113 266 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC019131.2-201ENST00000609071 870 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC093297.3-201ENST00000607056 2517 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 OR4C1P-202ENST00000641065 1569 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC036108.3-201ENST00000564527 2677 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 MAPK10-329ENST00000641555 2656 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 PDZK1P1-202ENST00000425209 1350 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 MTCO1P6-201ENST00000481192 1384 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 FMO8P-201ENST00000434461 1600 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 S100A8-201ENST00000368732 495 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 INIP-201ENST00000374234 713 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 DMKN-205ENST00000414866 867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 OR8B9P-201ENST00000419756 925 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 MRPS36P1-201ENST00000421291 307 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 PLCE1-AS2-204ENST00000438899 945 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC005002.1-201ENST00000447458 540 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 CALM1P2-201ENST00000452941 448 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 SSXP1-201ENST00000453640 473 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC099681.1-201ENST00000454777 552 ntTSL 4 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 IFNA22P-201ENST00000458710 570 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 RPL3P10-201ENST00000476002 1164 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 FCF1P3-201ENST00000496394 590 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC092807.3-202ENST00000498304 508 ntTSL 3 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC006499.5-201ENST00000505037 514 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 PRDX4P1-201ENST00000507189 574 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC090071.1-201ENST00000507713 644 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC010457.1-202ENST00000510137 337 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 RN7SKP52-201ENST00000516219 250 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 ZNF195-220ENST00000528796 881 ntTSL 5 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 CACNA1C-AS2-201ENST00000545526 609 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC078865.1-201ENST00000547174 562 ntTSL 4 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 ZNF519P3-201ENST00000557158 1032 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 HMGN2P46-207ENST00000568669 388 ntTSL 3 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 MIR3680-2-201ENST00000578247 87 ntBASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 AC018521.3-201ENST00000581213 816 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
DEPDC4Q8N2C3 MIR3680-1-201ENST00000581433 87 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms