Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SCUBE3Q8IX30 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SCUBE3Q8IX30 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SCUBE3Q8IX30 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SCUBE3Q8IX30 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SCUBE3Q8IX30 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.96□□□□□ -0.97
SCUBE3Q8IX30 FAM205BP-202ENST00000399773 4009 ntBASIC8.96□□□□□ -0.97
SCUBE3Q8IX30 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SCUBE3Q8IX30 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 RN7SKP25-201ENST00000362449 308 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 RNU6-348P-201ENST00000384386 107 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 CNN2P7-201ENST00000400583 932 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 RNU2-17P-201ENST00000410290 190 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 RPS15AP38-201ENST00000413110 372 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 UQCRHP2-201ENST00000415651 288 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC092431.2-201ENST00000441658 318 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 BMS1P10-201ENST00000443754 1120 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 Z99127.3-201ENST00000448158 395 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC069213.3-201ENST00000454858 474 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AL354872.1-201ENST00000456361 967 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 BUB3P1-201ENST00000458451 999 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 RN7SL757P-201ENST00000466709 301 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 KCNAB1-AS1-201ENST00000467794 456 ntTSL 2 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 RPSAP37-201ENST00000470913 821 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 RN7SL745P-201ENST00000484900 299 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC104971.1-201ENST00000495117 578 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC025459.1-201ENST00000504072 156 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 IGHVII-30-1-201ENST00000522218 301 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 SMARCE1P4-201ENST00000523647 241 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 MTCO3P15-201ENST00000526563 574 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AP004245.1-201ENST00000530434 259 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC005552.1-201ENST00000577556 662 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 CARSP1-201ENST00000603171 889 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AC004839.1-201ENST00000610269 501 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 AL592148.2-201ENST00000612210 372 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 CGA-206ENST00000630630 832 ntTSL 2 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 MFSD1P1-201ENST00000576210 1327 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 MTND4P27-201ENST00000450813 1354 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 NXF4-202ENST00000416098 1465 ntBASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.96□□□□□ -0.98
SCUBE3Q8IX30 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC092279.2-201ENST00000623742 2189 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 OR5E1P-201ENST00000305754 927 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 RNA5SP250-201ENST00000362534 119 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 Y_RNA.263-201ENST00000364659 114 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 Y_RNA.450-201ENST00000384198 113 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC003045.1-201ENST00000398779 713 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 OR2W4P-201ENST00000406496 926 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 VN2R10P-201ENST00000411871 853 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms