Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC090774.2-201ENST00000584708 322 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AP001160.4-201ENST00000596971 382 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AC069431.2-201ENST00000604149 1099 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AL136139.1-201ENST00000605568 222 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AC139795.3-201ENST00000606358 541 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 RN7SL778P-201ENST00000607160 297 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AC079395.3-201ENST00000615161 484 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AC007275.1-201ENST00000621243 671 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AL590396.4-201ENST00000636779 956 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AC069222.1-201ENST00000608028 3360 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AC090643.1-201ENST00000623600 3100 ntBASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM48Q8IWZ4 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC092999.1-201ENST00000624004 1924 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 RBM5-AS1-201ENST00000630404 1386 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC099654.3-201ENST00000447087 1546 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 RPL10P16-201ENST00000325000 645 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 RN7SKP36-201ENST00000363997 312 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL050305.1-201ENST00000399993 1230 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL139806.1-201ENST00000403057 1002 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 TYMSP1-201ENST00000407851 869 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 RN7SKP225-201ENST00000410405 352 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 CENPN-204ENST00000428963 971 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL645936.2-201ENST00000430565 928 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL512661.1-201ENST00000434586 1253 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC007000.2-201ENST00000442564 487 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 Z99714.1-201ENST00000450463 807 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC008620.1-201ENST00000468453 592 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL928654.1-201ENST00000476081 354 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 RN7SL423P-201ENST00000486202 304 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC106760.2-201ENST00000504159 619 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 OR4A42P-201ENST00000531397 938 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC011611.6-201ENST00000547483 255 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC074029.2-201ENST00000551045 634 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 FRG2IP-201ENST00000563581 781 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 MIR4509-3-201ENST00000578671 94 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 MIR4509-2-201ENST00000583920 94 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC006116.6-201ENST00000593258 1103 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 BNIP3P24-201ENST00000593398 557 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL589765.5-201ENST00000596133 515 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 FXYD6P1-201ENST00000604857 285 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC100847.1-201ENST00000611316 481 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL121583.1-201ENST00000612444 682 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 MIR4509-1-201ENST00000618224 94 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL355493.4-201ENST00000618530 292 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC117503.3-201ENST00000623811 601 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC132825.8-201ENST00000640783 297 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms