Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RBBP4P4-201ENST00000398588 1289 ntBASIC7.85□□□□□ -1.15
CCNA1P78396 AL590635.1-201ENST00000406314 586 ntBASIC7.85□□□□□ -1.15
CCNA1P78396 MIR1282-201ENST00000408865 101 ntBASIC7.85□□□□□ -1.15
CCNA1P78396 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.85□□□□□ -1.15
CCNA1P78396 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.85□□□□□ -1.15
CCNA1P78396 AC245047.5-201ENST00000437312 556 ntBASIC7.85□□□□□ -1.15
CCNA1P78396 AC068491.1-201ENST00000449539 1241 ntBASIC7.85□□□□□ -1.15
CCNA1P78396 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.85□□□□□ -1.15
CCNA1P78396 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCNA1P78396 GLRXP3-201ENST00000470810 321 ntBASIC7.85□□□□□ -1.15
CCNA1P78396 AC131233.1-201ENST00000479200 955 ntBASIC7.85□□□□□ -1.15
CCNA1P78396 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CCNA1P78396 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.85□□□□□ -1.15
CCNA1P78396 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCNA1P78396 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.85□□□□□ -1.15
CCNA1P78396 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.85□□□□□ -1.15
CCNA1P78396 AL499605.1-201ENST00000604628 403 ntBASIC7.85□□□□□ -1.15
CCNA1P78396 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.85□□□□□ -1.15
CCNA1P78396 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.85□□□□□ -1.15
CCNA1P78396 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CCNA1P78396 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.85□□□□□ -1.15
CCNA1P78396 MAPK10-357ENST00000641831 2858 ntBASIC7.85□□□□□ -1.15
CCNA1P78396 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.85□□□□□ -1.15
CCNA1P78396 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CCNA1P78396 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.85□□□□□ -1.15
CCNA1P78396 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC7.85□□□□□ -1.15
CCNA1P78396 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
CCNA1P78396 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCNA1P78396 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCNA1P78396 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCNA1P78396 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.84□□□□□ -1.15
CCNA1P78396 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCNA1P78396 ZNF840P-201ENST00000504759 1996 ntBASIC7.84□□□□□ -1.15
CCNA1P78396 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CCNA1P78396 AC007998.4-201ENST00000612496 2533 ntBASIC7.84□□□□□ -1.15
CCNA1P78396 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
CCNA1P78396 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCNA1P78396 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.84□□□□□ -1.15
CCNA1P78396 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCNA1P78396 RNA5SP321-201ENST00000362722 111 ntBASIC7.84□□□□□ -1.15
CCNA1P78396 RN7SKP47-201ENST00000365347 328 ntBASIC7.84□□□□□ -1.15
CCNA1P78396 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CCNA1P78396 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.84□□□□□ -1.15
CCNA1P78396 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.84□□□□□ -1.15
CCNA1P78396 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.84□□□□□ -1.15
CCNA1P78396 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.84□□□□□ -1.15
CCNA1P78396 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.84□□□□□ -1.15
CCNA1P78396 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.84□□□□□ -1.15
CCNA1P78396 AC104339.1-201ENST00000465478 348 ntBASIC7.84□□□□□ -1.15
CCNA1P78396 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.84□□□□□ -1.15
CCNA1P78396 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.84□□□□□ -1.15
CCNA1P78396 AC011853.1-201ENST00000518911 454 ntBASIC7.84□□□□□ -1.15
CCNA1P78396 TOMM20P1-201ENST00000534518 427 ntBASIC7.84□□□□□ -1.15
CCNA1P78396 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.84□□□□□ -1.15
CCNA1P78396 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.84□□□□□ -1.15
CCNA1P78396 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.84□□□□□ -1.15
CCNA1P78396 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.84□□□□□ -1.15
CCNA1P78396 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.84□□□□□ -1.15
CCNA1P78396 AC061999.1-201ENST00000624454 177 ntBASIC7.84□□□□□ -1.15
CCNA1P78396 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCNA1P78396 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCNA1P78396 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CCNA1P78396 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.84□□□□□ -1.15
CCNA1P78396 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCNA1P78396 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
CCNA1P78396 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
CCNA1P78396 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CCNA1P78396 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CCNA1P78396 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.83□□□□□ -1.16
CCNA1P78396 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.83□□□□□ -1.16
CCNA1P78396 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.83□□□□□ -1.16
CCNA1P78396 SNORD35A-201ENST00000363389 86 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.83□□□□□ -1.16
CCNA1P78396 RPL5P8-201ENST00000396820 815 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.83□□□□□ -1.16
CCNA1P78396 PSMA6P1-201ENST00000400275 741 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 PRELID1P1-201ENST00000403549 660 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 RN7SKP129-201ENST00000410288 299 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AL354794.2-201ENST00000424795 1248 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.83□□□□□ -1.16
CCNA1P78396 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.83□□□□□ -1.16
CCNA1P78396 AL354893.1-201ENST00000433735 348 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.83□□□□□ -1.16
CCNA1P78396 AL136981.1-203ENST00000451452 3844 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 MEF2AP1-201ENST00000454867 863 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AC005017.1-201ENST00000482002 490 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AC106822.1-201ENST00000502647 526 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AC091849.1-201ENST00000509920 121 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.83□□□□□ -1.16
CCNA1P78396 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms