Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 Z93929.1-201ENST00000418200 1475 ntBASIC6.47□□□□□ -1.37
SOX3P41225 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 AC022507.1-201ENST00000548349 1505 ntBASIC6.47□□□□□ -1.37
SOX3P41225 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SOX3P41225 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX3P41225 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX3P41225 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 RPL12P13-201ENST00000310055 497 ntBASIC6.47□□□□□ -1.37
SOX3P41225 MIR99A-201ENST00000384906 81 ntBASIC6.47□□□□□ -1.37
SOX3P41225 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 AC011742.2-201ENST00000443818 352 ntBASIC6.47□□□□□ -1.37
SOX3P41225 AC114982.2-201ENST00000461396 358 ntBASIC6.47□□□□□ -1.37
SOX3P41225 AC131233.1-201ENST00000479200 955 ntBASIC6.47□□□□□ -1.37
SOX3P41225 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX3P41225 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX3P41225 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.47□□□□□ -1.37
SOX3P41225 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX3P41225 AC244034.2-201ENST00000562504 509 ntBASIC6.47□□□□□ -1.37
SOX3P41225 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX3P41225 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX3P41225 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX3P41225 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX3P41225 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX3P41225 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX3P41225 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SOX3P41225 AC011447.2-201ENST00000592921 283 ntBASIC6.47□□□□□ -1.37
SOX3P41225 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 AC012065.3-201ENST00000602736 439 ntBASIC6.47□□□□□ -1.37
SOX3P41225 AC022001.1-201ENST00000605193 268 ntBASIC6.47□□□□□ -1.37
SOX3P41225 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX3P41225 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SOX3P41225 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX3P41225 HSPD1P1-201ENST00000503199 1726 ntBASIC6.47□□□□□ -1.37
SOX3P41225 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
SOX3P41225 AC062029.1-202ENST00000606164 3651 ntBASIC6.47□□□□□ -1.37
SOX3P41225 OR2AH1P-202ENST00000641232 2744 ntBASIC6.47□□□□□ -1.37
SOX3P41225 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX3P41225 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX3P41225 CDY19P-201ENST00000411668 1613 ntBASIC6.47□□□□□ -1.37
SOX3P41225 CDY18P-201ENST00000438294 1609 ntBASIC6.47□□□□□ -1.37
SOX3P41225 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
SOX3P41225 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.46□□□□□ -1.37
SOX3P41225 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SOX3P41225 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SOX3P41225 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.46□□□□□ -1.37
SOX3P41225 AL121949.2-201ENST00000403446 1548 ntBASIC6.46□□□□□ -1.37
SOX3P41225 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
SOX3P41225 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SOX3P41225 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SOX3P41225 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX3P41225 AL591848.4-201ENST00000567832 3472 ntBASIC6.46□□□□□ -1.38
SOX3P41225 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SOX3P41225 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX3P41225 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SOX3P41225 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SOX3P41225 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.46□□□□□ -1.38
SOX3P41225 RNU6-233P-201ENST00000410845 141 ntBASIC6.46□□□□□ -1.38
SOX3P41225 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX3P41225 CHCHD4P5-201ENST00000436684 427 ntBASIC6.46□□□□□ -1.38
SOX3P41225 PMS2P9-201ENST00000441237 515 ntBASIC6.46□□□□□ -1.38
SOX3P41225 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX3P41225 TATDN2P3-201ENST00000452855 3665 ntBASIC6.46□□□□□ -1.38
SOX3P41225 AC010878.1-201ENST00000456500 1047 ntBASIC6.46□□□□□ -1.38
SOX3P41225 AC022730.1-201ENST00000473114 568 ntBASIC6.46□□□□□ -1.38
SOX3P41225 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX3P41225 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX3P41225 OR10J9P-201ENST00000511932 987 ntBASIC6.46□□□□□ -1.38
SOX3P41225 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX3P41225 RN7SKP11-201ENST00000517018 287 ntBASIC6.46□□□□□ -1.38
SOX3P41225 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX3P41225 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX3P41225 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX3P41225 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.46□□□□□ -1.38
SOX3P41225 AC026458.1-201ENST00000564330 438 ntBASIC6.46□□□□□ -1.38
SOX3P41225 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.46□□□□□ -1.38
SOX3P41225 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX3P41225 RPS27AP19-201ENST00000597285 458 ntBASIC6.46□□□□□ -1.38
SOX3P41225 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX3P41225 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX3P41225 AC140479.4-205ENST00000636339 820 ntBASIC6.46□□□□□ -1.38
SOX3P41225 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX3P41225 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX3P41225 AP002800.1-201ENST00000624982 2225 ntBASIC6.46□□□□□ -1.38
SOX3P41225 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX3P41225 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX3P41225 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SOX3P41225 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX3P41225 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX3P41225 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX3P41225 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX3P41225 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms