Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.85□□□□□ -1.31
CAPN1P07384 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 DDX43P1-201ENST00000510713 1763 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.85□□□□□ -1.31
CAPN1P07384 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 RPL12P1-201ENST00000374520 498 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CAPN1P07384 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CAPN1P07384 FAUP2-201ENST00000394301 401 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.85□□□□□ -1.31
CAPN1P07384 EIF4A1P13-201ENST00000415667 230 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.85□□□□□ -1.31
CAPN1P07384 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.85□□□□□ -1.31
CAPN1P07384 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.85□□□□□ -1.31
CAPN1P07384 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.85□□□□□ -1.31
CAPN1P07384 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.85□□□□□ -1.31
CAPN1P07384 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.85□□□□□ -1.31
CAPN1P07384 SDHCP3-201ENST00000445371 506 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 MED28P7-201ENST00000456611 530 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 RPSAP24-201ENST00000461543 873 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 AC135721.2-201ENST00000464237 300 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 AC115223.1-201ENST00000466377 870 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.85□□□□□ -1.31
CAPN1P07384 RN7SL306P-201ENST00000492941 296 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 AC026826.1-201ENST00000493002 361 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.85□□□□□ -1.31
CAPN1P07384 NACAP6-201ENST00000509572 622 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 SUMO2P7-201ENST00000511179 285 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 RN7SKP98-201ENST00000517070 156 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.85□□□□□ -1.31
CAPN1P07384 AC090971.3-201ENST00000557871 1041 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.85□□□□□ -1.31
CAPN1P07384 AC100832.2-201ENST00000582080 776 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 AC013731.1-201ENST00000604340 883 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.85□□□□□ -1.31
CAPN1P07384 AL356585.10-201ENST00000641883 123 ntBASIC6.85□□□□□ -1.31
CAPN1P07384 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CAPN1P07384 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.85□□□□□ -1.31
CAPN1P07384 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CAPN1P07384 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.84□□□□□ -1.31
CAPN1P07384 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CAPN1P07384 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 RNA5SP114-201ENST00000363780 113 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 RNA5SP172-201ENST00000365061 118 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.84□□□□□ -1.31
CAPN1P07384 RN7SKP254-201ENST00000410685 310 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 RN7SKP85-201ENST00000411349 318 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 AC017035.1-201ENST00000411999 1115 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 DUTP4-201ENST00000424782 475 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 AC091390.2-201ENST00000432573 374 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.84□□□□□ -1.31
CAPN1P07384 OR51P1P-201ENST00000447547 942 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.84□□□□□ -1.31
CAPN1P07384 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.84□□□□□ -1.31
CAPN1P07384 SRP68P2-201ENST00000456184 254 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 AC079193.1-201ENST00000460497 588 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.84□□□□□ -1.31
CAPN1P07384 AC106800.2-201ENST00000514009 1103 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 RN7SKP233-201ENST00000517005 110 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.84□□□□□ -1.31
CAPN1P07384 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.84□□□□□ -1.31
CAPN1P07384 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.84□□□□□ -1.31
CAPN1P07384 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.84□□□□□ -1.31
CAPN1P07384 AC027796.1-201ENST00000575593 512 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.84□□□□□ -1.31
CAPN1P07384 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.84□□□□□ -1.31
CAPN1P07384 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.84□□□□□ -1.31
CAPN1P07384 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.84□□□□□ -1.31
CAPN1P07384 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CAPN1P07384 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.84□□□□□ -1.31
CAPN1P07384 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.84□□□□□ -1.31
CAPN1P07384 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.84□□□□□ -1.31
CAPN1P07384 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.84□□□□□ -1.31
CAPN1P07384 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CAPN1P07384 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CAPN1P07384 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.84□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms