Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.28
NUP43Q8NFH3 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
NUP43Q8NFH3 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.09□□□□□ -1.28
NUP43Q8NFH3 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 RN7SKP149-201ENST00000363008 344 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AL353625.1-202ENST00000366273 571 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 OSTCP5-201ENST00000425293 453 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 PRELID3BP10-201ENST00000431957 584 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 FABP5P3-201ENST00000437960 408 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC092570.2-201ENST00000452117 1143 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 RPS17P11-201ENST00000474297 293 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC126121.1-201ENST00000482313 553 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 RN7SL635P-201ENST00000492123 296 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 RN7SL124P-201ENST00000498656 285 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AL135933.1-201ENST00000498657 802 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC113420.1-201ENST00000507903 571 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC023794.3-204ENST00000510754 236 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 OR7E128P-201ENST00000532736 1024 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 CHCHD3P2-201ENST00000550751 639 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC027807.1-201ENST00000559921 996 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 MIR4642-201ENST00000583943 82 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AL137190.1-201ENST00000603288 282 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AL021918.1-201ENST00000603933 236 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AL391903.2-201ENST00000614532 247 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC079456.1-201ENST00000624010 480 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC073488.8-201ENST00000631952 757 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC083865.1-201ENST00000636634 831 ntBASIC7.08□□□□□ -1.28
NUP43Q8NFH3 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP43Q8NFH3 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.07□□□□□ -1.28
NUP43Q8NFH3 RNU5B-4P-201ENST00000363508 111 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms