Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 IGHVII-22-1-201ENST00000517888 265 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC018448.2-201ENST00000548295 305 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AL121579.1-201ENST00000555129 305 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC011270.1-201ENST00000558606 583 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC018697.1-202ENST00000582650 592 ntTSL 4 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 PRELID3BP3-201ENST00000584963 545 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC087468.1-201ENST00000604365 630 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC104794.4-201ENST00000607181 446 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AP000255.1-201ENST00000610276 676 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC025031.3-201ENST00000611566 368 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 MIR6829-201ENST00000620375 67 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 LINC01588-217ENST00000635379 1595 ntTSL 5 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 MIR3976HG-202ENST00000566533 1690 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 CR381670.1-201ENST00000624291 1693 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 NF1P2-201ENST00000556855 2505 ntBASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
FOXR1Q6PIV2 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC011379.1-201ENST00000508713 3025 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 ZNF840P-201ENST00000504759 1996 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 MTND5P17-201ENST00000418405 1603 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 CDY15P-201ENST00000421995 1570 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 CDY22P-201ENST00000451423 1554 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 XGY1-201ENST00000381172 446 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 SNORD116-12-201ENST00000384468 92 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 SNORA35-201ENST00000386104 128 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 ATP5F1P3-201ENST00000397213 657 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC245052.5-201ENST00000416320 649 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 USP9YP20-201ENST00000419224 558 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 FBP2P1-202ENST00000424473 530 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 MTND1P2-201ENST00000430604 821 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 TRIM60P8Y-201ENST00000436338 762 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 CICP10-201ENST00000439497 198 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 USP9YP29-201ENST00000445112 563 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 RN7SL598P-201ENST00000494391 294 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 PFN2-213ENST00000494827 793 ntTSL 4 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 RN7SL792P-201ENST00000496286 305 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC114940.1-201ENST00000512162 1265 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 RNU6-491P-201ENST00000516099 110 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms