Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MIR6807-201ENST00000621968 92 ntBASIC7.15□□□□□ -1.26
SLC1A1P43005 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SLC1A1P43005 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.27
SLC1A1P43005 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.15□□□□□ -1.27
SLC1A1P43005 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SLC1A1P43005 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SLC1A1P43005 AL451064.2-201ENST00000623514 1654 ntBASIC7.15□□□□□ -1.27
SLC1A1P43005 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.15□□□□□ -1.27
SLC1A1P43005 EIF3EP2-201ENST00000423042 1814 ntBASIC7.15□□□□□ -1.27
SLC1A1P43005 AC013488.1-201ENST00000526618 1838 ntBASIC7.15□□□□□ -1.27
SLC1A1P43005 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
SLC1A1P43005 AC009120.2-204ENST00000621548 2032 ntBASIC7.15□□□□□ -1.27
SLC1A1P43005 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.15□□□□□ -1.27
SLC1A1P43005 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.15□□□□□ -1.27
SLC1A1P43005 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.15□□□□□ -1.27
SLC1A1P43005 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.15□□□□□ -1.27
SLC1A1P43005 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SLC1A1P43005 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SLC1A1P43005 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SLC1A1P43005 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SLC1A1P43005 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SLC1A1P43005 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SLC1A1P43005 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SLC1A1P43005 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.14□□□□□ -1.27
SLC1A1P43005 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SLC1A1P43005 RNA5SP512-201ENST00000364550 120 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SLC1A1P43005 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SLC1A1P43005 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.14□□□□□ -1.27
SLC1A1P43005 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SLC1A1P43005 RBMY2JP-201ENST00000425544 1059 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 AL645936.2-201ENST00000430565 928 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.14□□□□□ -1.27
SLC1A1P43005 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.14□□□□□ -1.27
SLC1A1P43005 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.14□□□□□ -1.27
SLC1A1P43005 SRP68P2-201ENST00000456184 254 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.14□□□□□ -1.27
SLC1A1P43005 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SLC1A1P43005 OR4C1P-201ENST00000530880 937 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.14□□□□□ -1.27
SLC1A1P43005 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC244034.2-201ENST00000562504 509 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC012065.3-201ENST00000602736 439 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 AC005034.3-201ENST00000604845 1747 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 AC012510.1-201ENST00000607946 759 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC017037.4-201ENST00000624526 826 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.14□□□□□ -1.27
SLC1A1P43005 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC004014.2-201ENST00000623718 5122 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.14□□□□□ -1.27
SLC1A1P43005 AC062029.1-202ENST00000606164 3651 ntBASIC7.14□□□□□ -1.27
SLC1A1P43005 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SLC1A1P43005 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SLC1A1P43005 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SLC1A1P43005 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.13□□□□□ -1.27
SLC1A1P43005 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SLC1A1P43005 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SLC1A1P43005 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SLC1A1P43005 CDY5P-201ENST00000411487 1580 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 CDY9P-201ENST00000451397 1580 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SLC1A1P43005 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.13□□□□□ -1.27
SLC1A1P43005 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SLC1A1P43005 CYCSP17-201ENST00000407870 315 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 RNA5SP280-201ENST00000411230 115 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 RPS21P8-201ENST00000413365 247 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 CLIC4P3-201ENST00000422221 752 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.13□□□□□ -1.27
SLC1A1P43005 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.13□□□□□ -1.27
SLC1A1P43005 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.13□□□□□ -1.27
SLC1A1P43005 PHBP4-201ENST00000437447 837 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.13□□□□□ -1.27
SLC1A1P43005 RPS26P11-201ENST00000463445 348 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 RPS26P6-201ENST00000475156 348 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 AC021146.11-201ENST00000503319 491 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.13□□□□□ -1.27
SLC1A1P43005 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.13□□□□□ -1.27
SLC1A1P43005 AL109628.1-201ENST00000556877 366 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.13□□□□□ -1.27
SLC1A1P43005 CTSLP2-201ENST00000580501 394 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 EXOSC3P2-201ENST00000594464 497 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 AC104117.5-201ENST00000606195 547 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.13□□□□□ -1.27
SLC1A1P43005 AL161931.1-201ENST00000612768 246 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.13□□□□□ -1.27
SLC1A1P43005 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.13□□□□□ -1.27
SLC1A1P43005 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.13□□□□□ -1.27
SLC1A1P43005 AL596275.2-208ENST00000641192 594 ntBASIC7.13□□□□□ -1.27
SLC1A1P43005 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms