Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC007938.1-201ENST00000562524 2902 ntBASIC6.49□□□□□ -1.37
SOX3P41225 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SOX3P41225 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX3P41225 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX3P41225 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX3P41225 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX3P41225 TPTE2P2-201ENST00000403471 1466 ntBASIC6.49□□□□□ -1.37
SOX3P41225 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SOX3P41225 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX3P41225 AL596244.1-201ENST00000567068 3779 ntBASIC6.49□□□□□ -1.37
SOX3P41225 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX3P41225 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SOX3P41225 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX3P41225 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX3P41225 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX3P41225 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SOX3P41225 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.49□□□□□ -1.37
SOX3P41225 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.49□□□□□ -1.37
SOX3P41225 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX3P41225 VN1R66P-201ENST00000412929 916 ntBASIC6.49□□□□□ -1.37
SOX3P41225 AC091492.1-201ENST00000419844 272 ntBASIC6.49□□□□□ -1.37
SOX3P41225 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX3P41225 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX3P41225 PUDPP2-201ENST00000431423 643 ntBASIC6.49□□□□□ -1.37
SOX3P41225 AC009518.3-201ENST00000438972 253 ntBASIC6.49□□□□□ -1.37
SOX3P41225 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX3P41225 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX3P41225 SDHCP3-201ENST00000445371 506 ntBASIC6.49□□□□□ -1.37
SOX3P41225 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX3P41225 AC009244.1-201ENST00000450566 258 ntBASIC6.49□□□□□ -1.37
SOX3P41225 RN7SL868P-201ENST00000485915 303 ntBASIC6.49□□□□□ -1.37
SOX3P41225 AP005202.1-201ENST00000489915 867 ntBASIC6.49□□□□□ -1.37
SOX3P41225 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX3P41225 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX3P41225 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX3P41225 AC069240.2-201ENST00000550242 609 ntBASIC6.49□□□□□ -1.37
SOX3P41225 MIR3135A-201ENST00000578460 77 ntBASIC6.49□□□□□ -1.37
SOX3P41225 WDR45BP1-201ENST00000583470 1029 ntBASIC6.49□□□□□ -1.37
SOX3P41225 MIR4428-201ENST00000584884 73 ntBASIC6.49□□□□□ -1.37
SOX3P41225 CYCSP1-201ENST00000604815 315 ntBASIC6.49□□□□□ -1.37
SOX3P41225 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.49□□□□□ -1.37
SOX3P41225 AC007671.1-201ENST00000616957 830 ntBASIC6.49□□□□□ -1.37
SOX3P41225 AC034229.6-201ENST00000623704 224 ntBASIC6.49□□□□□ -1.37
SOX3P41225 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX3P41225 MAPK10-344ENST00000641718 3746 ntBASIC6.49□□□□□ -1.37
SOX3P41225 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SOX3P41225 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX3P41225 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX3P41225 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SOX3P41225 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SOX3P41225 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX3P41225 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX3P41225 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX3P41225 AL512353.3-201ENST00000417517 1326 ntBASIC6.49□□□□□ -1.37
SOX3P41225 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX3P41225 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX3P41225 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX3P41225 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX3P41225 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.48□□□□□ -1.37
SOX3P41225 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SOX3P41225 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 RPL17P17-201ENST00000419491 557 ntBASIC6.48□□□□□ -1.37
SOX3P41225 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX3P41225 AL604028.2-201ENST00000437848 788 ntBASIC6.48□□□□□ -1.37
SOX3P41225 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX3P41225 OR51P1P-201ENST00000447547 942 ntBASIC6.48□□□□□ -1.37
SOX3P41225 AP000805.1-201ENST00000471604 784 ntBASIC6.48□□□□□ -1.37
SOX3P41225 SCARNA11.1-201ENST00000516918 132 ntBASIC6.48□□□□□ -1.37
SOX3P41225 CARSP2-201ENST00000520688 277 ntBASIC6.48□□□□□ -1.37
SOX3P41225 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.48□□□□□ -1.37
SOX3P41225 PHBP2-201ENST00000532859 806 ntBASIC6.48□□□□□ -1.37
SOX3P41225 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.48□□□□□ -1.37
SOX3P41225 EIF4A3P1-201ENST00000578499 647 ntBASIC6.48□□□□□ -1.37
SOX3P41225 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX3P41225 AC100832.2-201ENST00000582080 776 ntBASIC6.48□□□□□ -1.37
SOX3P41225 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
SOX3P41225 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX3P41225 AL591222.2-201ENST00000604443 754 ntBASIC6.48□□□□□ -1.37
SOX3P41225 AL513218.1-201ENST00000606527 391 ntBASIC6.48□□□□□ -1.37
SOX3P41225 MIR6070-201ENST00000613967 103 ntBASIC6.48□□□□□ -1.37
SOX3P41225 AC073263.3-201ENST00000624449 858 ntBASIC6.48□□□□□ -1.37
SOX3P41225 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX3P41225 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SOX3P41225 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX3P41225 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SOX3P41225 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
SOX3P41225 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SOX3P41225 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX3P41225 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX3P41225 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms