Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CIITAP33076 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 AC089998.1-201ENST00000548575 3141 ntBASIC7.73□□□□□ -1.17
CIITAP33076 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.73□□□□□ -1.17
CIITAP33076 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 AL136100.1-201ENST00000407696 330 ntBASIC7.73□□□□□ -1.17
CIITAP33076 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.73□□□□□ -1.17
CIITAP33076 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.73□□□□□ -1.17
CIITAP33076 PTPN2P1-201ENST00000423212 1072 ntBASIC7.73□□□□□ -1.17
CIITAP33076 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.73□□□□□ -1.17
CIITAP33076 AC000089.1-201ENST00000424559 801 ntBASIC7.73□□□□□ -1.17
CIITAP33076 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.73□□□□□ -1.17
CIITAP33076 AL121578.2-201ENST00000448797 447 ntBASIC7.73□□□□□ -1.17
CIITAP33076 AL390728.3-201ENST00000452704 270 ntBASIC7.73□□□□□ -1.17
CIITAP33076 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.73□□□□□ -1.17
CIITAP33076 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.73□□□□□ -1.17
CIITAP33076 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.73□□□□□ -1.17
CIITAP33076 AC010442.1-201ENST00000515583 816 ntBASIC7.73□□□□□ -1.17
CIITAP33076 AC140063.1-201ENST00000541343 259 ntBASIC7.73□□□□□ -1.17
CIITAP33076 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.73□□□□□ -1.17
CIITAP33076 CTSLP2-201ENST00000580501 394 ntBASIC7.73□□□□□ -1.17
CIITAP33076 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.73□□□□□ -1.17
CIITAP33076 AC061999.1-201ENST00000624454 177 ntBASIC7.73□□□□□ -1.17
CIITAP33076 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CIITAP33076 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.73□□□□□ -1.17
CIITAP33076 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.73□□□□□ -1.17
CIITAP33076 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.72□□□□□ -1.17
CIITAP33076 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 Z97989.1-201ENST00000531702 2421 ntBASIC7.72□□□□□ -1.17
CIITAP33076 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CIITAP33076 ZNF806-201ENST00000438300 1774 ntBASIC7.72□□□□□ -1.17
CIITAP33076 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.72□□□□□ -1.17
CIITAP33076 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.72□□□□□ -1.17
CIITAP33076 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CIITAP33076 RNA5SP474-201ENST00000391234 90 ntBASIC7.72□□□□□ -1.17
CIITAP33076 AC026310.1-201ENST00000396004 378 ntBASIC7.72□□□□□ -1.17
CIITAP33076 AL353133.1-201ENST00000407695 401 ntBASIC7.72□□□□□ -1.17
CIITAP33076 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 AL590128.1-201ENST00000433407 286 ntBASIC7.72□□□□□ -1.17
CIITAP33076 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.72□□□□□ -1.17
CIITAP33076 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CIITAP33076 RPL5P11-201ENST00000498068 893 ntBASIC7.72□□□□□ -1.17
CIITAP33076 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 AC026774.2-201ENST00000513990 1098 ntBASIC7.72□□□□□ -1.17
CIITAP33076 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.72□□□□□ -1.17
CIITAP33076 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC7.72□□□□□ -1.17
CIITAP33076 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.72□□□□□ -1.17
CIITAP33076 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.72□□□□□ -1.17
CIITAP33076 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
CIITAP33076 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 DIMT1P1-201ENST00000603970 763 ntBASIC7.72□□□□□ -1.17
CIITAP33076 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.72□□□□□ -1.17
CIITAP33076 AC005899.6-201ENST00000620729 297 ntBASIC7.72□□□□□ -1.17
CIITAP33076 AC025287.2-201ENST00000621911 668 ntBASIC7.72□□□□□ -1.17
CIITAP33076 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.72□□□□□ -1.17
CIITAP33076 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.72□□□□□ -1.17
CIITAP33076 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.72□□□□□ -1.17
CIITAP33076 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 AL136981.1-203ENST00000451452 3844 ntBASIC7.72□□□□□ -1.17
CIITAP33076 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 BX322650.1-201ENST00000332359 2143 ntBASIC7.72□□□□□ -1.17
CIITAP33076 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CIITAP33076 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CIITAP33076 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CIITAP33076 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.71□□□□□ -1.17
CIITAP33076 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.71□□□□□ -1.17
CIITAP33076 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.71□□□□□ -1.17
CIITAP33076 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
CIITAP33076 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
CIITAP33076 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.71□□□□□ -1.17
CIITAP33076 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.71□□□□□ -1.18
CIITAP33076 AL451064.2-201ENST00000623514 1654 ntBASIC7.71□□□□□ -1.18
CIITAP33076 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms