Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SHC1P29353 AC018804.1-201ENST00000430381 618 ntBASIC6.3□□□□□ -1.4
SHC1P29353 OSTCP2-201ENST00000437956 444 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.3□□□□□ -1.4
SHC1P29353 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.3□□□□□ -1.4
SHC1P29353 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.3□□□□□ -1.4
SHC1P29353 RBMY2EP-202ENST00000456360 940 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AC135721.2-201ENST00000464237 300 ntBASIC6.3□□□□□ -1.4
SHC1P29353 RPS16P9-201ENST00000477220 427 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AC026826.1-201ENST00000493002 361 ntBASIC6.3□□□□□ -1.4
SHC1P29353 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.3□□□□□ -1.4
SHC1P29353 AL135933.1-201ENST00000498657 802 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.3□□□□□ -1.4
SHC1P29353 RN7SKP11-201ENST00000517018 287 ntBASIC6.3□□□□□ -1.4
SHC1P29353 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.3□□□□□ -1.4
SHC1P29353 SLC25A51P2-201ENST00000535708 889 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.3□□□□□ -1.4
SHC1P29353 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 DPPA3P2-201ENST00000553589 478 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AL135978.1-201ENST00000553618 1266 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AC023827.2-201ENST00000566880 1061 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AC091932.1-201ENST00000569381 427 ntBASIC6.3□□□□□ -1.4
SHC1P29353 ADAM3B-201ENST00000569937 840 ntBASIC6.3□□□□□ -1.4
SHC1P29353 RN7SL426P-201ENST00000579106 295 ntBASIC6.3□□□□□ -1.4
SHC1P29353 MIR5682-201ENST00000584864 76 ntBASIC6.3□□□□□ -1.4
SHC1P29353 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.3□□□□□ -1.4
SHC1P29353 MIR8082-201ENST00000612488 81 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AC073263.3-201ENST00000624449 858 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.3□□□□□ -1.4
SHC1P29353 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 AC110716.2-201ENST00000563865 3945 ntBASIC6.3□□□□□ -1.4
SHC1P29353 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
SHC1P29353 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SHC1P29353 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.3□□□□□ -1.4
SHC1P29353 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SHC1P29353 AC125603.4-201ENST00000621942 2699 ntBASIC6.3□□□□□ -1.4
SHC1P29353 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SHC1P29353 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.3□□□□□ -1.4
SHC1P29353 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.29□□□□□ -1.4
SHC1P29353 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHC1P29353 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.29□□□□□ -1.4
SHC1P29353 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.29□□□□□ -1.4
SHC1P29353 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHC1P29353 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SHC1P29353 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHC1P29353 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHC1P29353 AL451061.1-201ENST00000407887 862 ntBASIC6.29□□□□□ -1.4
SHC1P29353 RN7SKP268-201ENST00000411107 316 ntBASIC6.29□□□□□ -1.4
SHC1P29353 MEAF6P1-201ENST00000416092 327 ntBASIC6.29□□□□□ -1.4
SHC1P29353 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.29□□□□□ -1.4
SHC1P29353 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.29□□□□□ -1.4
SHC1P29353 GAPDHP69-201ENST00000425504 1008 ntBASIC6.29□□□□□ -1.4
SHC1P29353 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SHC1P29353 RPS19P6-201ENST00000441327 433 ntBASIC6.29□□□□□ -1.4
SHC1P29353 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.29□□□□□ -1.4
SHC1P29353 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.29□□□□□ -1.4
SHC1P29353 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 RNA5SP96-201ENST00000516041 107 ntBASIC6.29□□□□□ -1.4
SHC1P29353 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.29□□□□□ -1.4
SHC1P29353 IGLVV-66-201ENST00000523818 341 ntBASIC6.29□□□□□ -1.4
SHC1P29353 AC126323.4-201ENST00000566935 234 ntBASIC6.29□□□□□ -1.4
SHC1P29353 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.29□□□□□ -1.4
SHC1P29353 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.29□□□□□ -1.4
SHC1P29353 AC027506.1-201ENST00000621395 198 ntBASIC6.29□□□□□ -1.4
SHC1P29353 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.29□□□□□ -1.4
SHC1P29353 AL049541.2-201ENST00000626377 555 ntBASIC6.29□□□□□ -1.4
SHC1P29353 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.29□□□□□ -1.4
SHC1P29353 AC006453.3-201ENST00000635891 377 ntBASIC6.29□□□□□ -1.4
SHC1P29353 AL596275.2-208ENST00000641192 594 ntBASIC6.29□□□□□ -1.4
SHC1P29353 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHC1P29353 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHC1P29353 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHC1P29353 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHC1P29353 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHC1P29353 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHC1P29353 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.29□□□□□ -1.4
SHC1P29353 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHC1P29353 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHC1P29353 OR2A3P-202ENST00000641249 1776 ntBASIC6.29□□□□□ -1.4
SHC1P29353 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms