Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGA1P17096 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 AC117394.1-201ENST00000477323 567 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 RN7SL382P-201ENST00000482631 282 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 RN7SL413P-201ENST00000482700 297 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 AC106822.1-201ENST00000502647 526 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGA1P17096 RNA5SP473-201ENST00000516402 125 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGA1P17096 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGA1P17096 AC107958.1-201ENST00000556576 290 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGA1P17096 MT1CP-201ENST00000567054 174 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGA1P17096 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGA1P17096 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGA1P17096 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
HMGA1P17096 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HMGA1P17096 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGA1P17096 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGA1P17096 AC015871.3-201ENST00000618835 2261 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGA1P17096 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGA1P17096 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
HMGA1P17096 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 AL034417.4-202ENST00000642135 2236 ntBASIC7.01□□□□□ -1.29
HMGA1P17096 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGA1P17096 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGA1P17096 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
HMGA1P17096 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGA1P17096 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGA1P17096 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.01□□□□□ -1.29
HMGA1P17096 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HMGA1P17096 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGA1P17096 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGA1P17096 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGA1P17096 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGA1P17096 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGA1P17096 AC093816.1-201ENST00000515076 913 ntBASIC7.01□□□□□ -1.29
HMGA1P17096 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.01□□□□□ -1.29
HMGA1P17096 AC121758.1-202ENST00000556917 658 ntBASIC7.01□□□□□ -1.29
HMGA1P17096 AC037479.1-201ENST00000558361 625 ntBASIC7.01□□□□□ -1.29
HMGA1P17096 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGA1P17096 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGA1P17096 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.01□□□□□ -1.29
HMGA1P17096 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGA1P17096 AC012676.3-201ENST00000614983 479 ntBASIC7.01□□□□□ -1.29
HMGA1P17096 uc_338.29-201ENST00000615099 168 ntBASIC7.01□□□□□ -1.29
HMGA1P17096 AC116631.1-202ENST00000640984 683 ntBASIC7.01□□□□□ -1.29
HMGA1P17096 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGA1P17096 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGA1P17096 AL136981.1-203ENST00000451452 3844 ntBASIC7.01□□□□□ -1.29
HMGA1P17096 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGA1P17096 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7□□□□□ -1.29
HMGA1P17096 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7□□□□□ -1.29
HMGA1P17096 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
HMGA1P17096 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC7□□□□□ -1.29
HMGA1P17096 AC104447.1-201ENST00000624214 2124 ntBASIC7□□□□□ -1.29
HMGA1P17096 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7□□□□□ -1.29
HMGA1P17096 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HMGA1P17096 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HMGA1P17096 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HMGA1P17096 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7□□□□□ -1.29
HMGA1P17096 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
HMGA1P17096 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HMGA1P17096 SNORA11.5-201ENST00000408163 128 ntBASIC7□□□□□ -1.29
HMGA1P17096 ALDH7A1P4-201ENST00000412255 178 ntBASIC7□□□□□ -1.29
HMGA1P17096 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMGA1P17096 CDK7P1-201ENST00000434574 693 ntBASIC7□□□□□ -1.29
HMGA1P17096 CRYGGP-201ENST00000443337 145 ntBASIC7□□□□□ -1.29
HMGA1P17096 AC002486.2-201ENST00000447806 590 ntBASIC7□□□□□ -1.29
HMGA1P17096 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7□□□□□ -1.29
HMGA1P17096 AC026826.1-201ENST00000493002 361 ntBASIC7□□□□□ -1.29
HMGA1P17096 SLC25A14P1-201ENST00000502867 901 ntBASIC7□□□□□ -1.29
HMGA1P17096 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
HMGA1P17096 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMGA1P17096 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7□□□□□ -1.29
HMGA1P17096 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7□□□□□ -1.29
HMGA1P17096 OR4A41P-201ENST00000533053 928 ntBASIC7□□□□□ -1.29
HMGA1P17096 TDGP1-201ENST00000543961 1229 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms