Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 CYCSP17-201ENST00000407870 315 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 RNU2-18P-201ENST00000411224 162 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 PAICSP2-201ENST00000429118 1150 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 AC245291.3-201ENST00000443400 292 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 AC092601.1-201ENST00000444526 383 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 RPL23AP28-201ENST00000448062 470 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 OR7A15P-201ENST00000449848 1009 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 MTCO3P42-201ENST00000509488 518 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 MTCO3P39-201ENST00000514812 518 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 OR4A21P-201ENST00000532759 944 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 AC007068.2-201ENST00000543168 395 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 ULK4P1-202ENST00000565174 503 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 HNRNPA3P9-201ENST00000604913 979 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 AC009779.8-202ENST00000607990 932 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 AC026951.2-201ENST00000613847 241 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 AL035555.1-201ENST00000404462 1790 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-DOAP06340 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 MAPK10-377ENST00000642006 2752 ntBASIC8.09□□□□□ -1.11
HLA-DOAP06340 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
HLA-DOAP06340 MAPK10-379ENST00000642013 1385 ntBASIC8.09□□□□□ -1.12
HLA-DOAP06340 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
HLA-DOAP06340 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
HLA-DOAP06340 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AKR1B10P1-201ENST00000425765 942 ntBASIC8.08□□□□□ -1.12
HLA-DOAP06340 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 PFN1P11-201ENST00000445829 389 ntBASIC8.08□□□□□ -1.12
HLA-DOAP06340 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AC098818.1-201ENST00000478593 252 ntBASIC8.08□□□□□ -1.12
HLA-DOAP06340 AL117692.1-201ENST00000494283 713 ntBASIC8.08□□□□□ -1.12
HLA-DOAP06340 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms