Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC090774.4-201ENST00000578888 1372 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 RNA5SP53-201ENST00000391299 120 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 DUTP4-201ENST00000424782 475 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AP001994.1-201ENST00000527539 826 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC026458.1-201ENST00000564330 438 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC111186.1-201ENST00000604684 130 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC092960.1-201ENST00000604762 351 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 RN7SL126P-201ENST00000616400 299 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC243960.7-201ENST00000623532 707 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC087894.3-201ENST00000623682 349 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 LCOR-201ENST00000286067 4542 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC073342.2-201ENST00000595842 1800 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 MRPS17P1-201ENST00000596009 3130 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 U3.48-201ENST00000363172 216 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AL359633.1-201ENST00000421403 310 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 HMGB1P32-201ENST00000425971 565 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC239800.1-201ENST00000442049 719 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC068491.1-201ENST00000449539 1241 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AL929410.2-201ENST00000451170 189 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC010878.1-201ENST00000456500 1047 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AP000805.1-201ENST00000471604 784 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 RN7SL776P-201ENST00000493390 268 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 RN7SKP233-201ENST00000517005 110 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 EEF1B2P2-201ENST00000519625 676 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 NF1P12-201ENST00000549593 583 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 SNRPGP1-201ENST00000553864 222 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC087575.1-201ENST00000585087 229 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC005520.3-201ENST00000602874 370 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC122710.3-201ENST00000606566 541 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 AC239803.2-201ENST00000610161 430 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms