Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.37□□□□□ -1.39
SSX4O60224 AL357556.1-201ENST00000421884 1388 ntBASIC6.37□□□□□ -1.39
SSX4O60224 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX4O60224 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SSX4O60224 AL117378.2-201ENST00000622916 1337 ntBASIC6.37□□□□□ -1.39
SSX4O60224 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SSX4O60224 RPL12P13-201ENST00000310055 497 ntBASIC6.37□□□□□ -1.39
SSX4O60224 RNU1-38P-201ENST00000362817 144 ntBASIC6.37□□□□□ -1.39
SSX4O60224 U3.48-201ENST00000363172 216 ntBASIC6.37□□□□□ -1.39
SSX4O60224 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SSX4O60224 SNORA2C-201ENST00000408564 137 ntBASIC6.37□□□□□ -1.39
SSX4O60224 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SSX4O60224 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX4O60224 PGBD4P1-201ENST00000473644 407 ntBASIC6.37□□□□□ -1.39
SSX4O60224 AC233724.10-201ENST00000510454 409 ntBASIC6.37□□□□□ -1.39
SSX4O60224 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX4O60224 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX4O60224 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX4O60224 OR4A1P-201ENST00000532342 920 ntBASIC6.37□□□□□ -1.39
SSX4O60224 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.37□□□□□ -1.39
SSX4O60224 EGLN3P1-201ENST00000541727 720 ntBASIC6.37□□□□□ -1.39
SSX4O60224 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX4O60224 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX4O60224 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX4O60224 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX4O60224 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX4O60224 CUX2P1-201ENST00000606426 298 ntBASIC6.37□□□□□ -1.39
SSX4O60224 RN7SL778P-201ENST00000607160 297 ntBASIC6.37□□□□□ -1.39
SSX4O60224 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SSX4O60224 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 AC106795.5-201ENST00000623288 454 ntBASIC6.37□□□□□ -1.39
SSX4O60224 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.37□□□□□ -1.39
SSX4O60224 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX4O60224 AC243725.1-201ENST00000637164 436 ntBASIC6.37□□□□□ -1.39
SSX4O60224 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX4O60224 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
SSX4O60224 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
SSX4O60224 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 TATDN2P3-201ENST00000452855 3665 ntBASIC6.37□□□□□ -1.39
SSX4O60224 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 AC020978.6-201ENST00000571197 3177 ntBASIC6.36□□□□□ -1.39
SSX4O60224 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX4O60224 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
SSX4O60224 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX4O60224 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SSX4O60224 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX4O60224 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX4O60224 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX4O60224 AC087045.3-201ENST00000623046 2468 ntBASIC6.36□□□□□ -1.39
SSX4O60224 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX4O60224 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX4O60224 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SSX4O60224 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SSX4O60224 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX4O60224 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX4O60224 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SSX4O60224 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX4O60224 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX4O60224 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX4O60224 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX4O60224 AC018892.2-201ENST00000457656 693 ntBASIC6.36□□□□□ -1.39
SSX4O60224 RN7SL456P-201ENST00000469290 295 ntBASIC6.36□□□□□ -1.39
SSX4O60224 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
SSX4O60224 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX4O60224 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX4O60224 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX4O60224 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX4O60224 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX4O60224 AC005070.2-201ENST00000604391 260 ntBASIC6.36□□□□□ -1.39
SSX4O60224 AL096855.2-201ENST00000605785 369 ntBASIC6.36□□□□□ -1.39
SSX4O60224 AL022238.3-201ENST00000609279 443 ntBASIC6.36□□□□□ -1.39
SSX4O60224 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX4O60224 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.36□□□□□ -1.39
SSX4O60224 AC117503.3-201ENST00000623811 601 ntBASIC6.36□□□□□ -1.39
SSX4O60224 AP003108.4-201ENST00000623917 878 ntBASIC6.36□□□□□ -1.39
SSX4O60224 AC129908.1-201ENST00000624553 648 ntBASIC6.36□□□□□ -1.39
SSX4O60224 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SSX4O60224 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SSX4O60224 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
SSX4O60224 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX4O60224 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SSX4O60224 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX4O60224 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX4O60224 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SSX4O60224 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX4O60224 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX4O60224 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
SSX4O60224 AP000641.1-201ENST00000531988 1639 ntBASIC6.36□□□□□ -1.39
SSX4O60224 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SSX4O60224 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms