Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AL138693.1-201ENST00000622219 129 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC140479.4-205ENST00000636339 820 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC183089.2-201ENST00000637931 916 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AC107980.1-201ENST00000558671 3355 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AC007993.1-201ENST00000621298 2430 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AL359715.1-201ENST00000404330 555 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AL121916.1-201ENST00000429405 308 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 GOT2P2-201ENST00000450663 1251 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 RN7SL372P-201ENST00000461982 298 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 RN7SL790P-201ENST00000474043 298 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AC026254.2-201ENST00000475295 371 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AP005202.1-201ENST00000489915 867 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AC113191.1-201ENST00000517759 403 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 MIR3135A-201ENST00000578460 77 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AC020765.1-201ENST00000604296 328 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 AC110716.2-201ENST00000563865 3945 ntBASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
CLIP2Q9UDT6 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP2Q9UDT6 AC132219.2-201ENST00000624416 2327 ntBASIC8.21□□□□□ -1.09
CLIP2Q9UDT6 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
CLIP2Q9UDT6 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.21□□□□□ -1.09
CLIP2Q9UDT6 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP2Q9UDT6 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.21□□□□□ -1.09
CLIP2Q9UDT6 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
CLIP2Q9UDT6 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP2Q9UDT6 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP2Q9UDT6 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 AC079248.1-201ENST00000427568 1546 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 SUMO2P13-201ENST00000403109 272 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 LSM3P3-201ENST00000436601 306 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 AGKP1-201ENST00000455254 1263 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 AC010878.1-201ENST00000456500 1047 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 RN7SL834P-201ENST00000461450 286 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 UOX-201ENST00000471089 899 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 RPL23AP80-201ENST00000495605 424 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 PABPC1P1-201ENST00000506347 591 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 IGLVV-66-201ENST00000523818 341 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 AC026458.1-201ENST00000564330 438 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 MIR4312-201ENST00000579909 76 ntBASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms