Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LSM3P3-201ENST00000436601 306 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AL604028.2-201ENST00000437848 788 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC104837.1-201ENST00000444644 1587 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 BX323845.2-201ENST00000458382 234 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 MTCO1P55-201ENST00000489829 745 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC023818.1-201ENST00000498379 384 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC097460.2-201ENST00000511857 741 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC106800.2-201ENST00000514009 1103 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 RNA5SP518-201ENST00000515957 119 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 OR5M6P-201ENST00000530227 937 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 NDUFA3P2-201ENST00000531434 232 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AL031846.1-201ENST00000560933 314 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ACTG1P15-201ENST00000570019 1063 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC096708.2-201ENST00000577676 512 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 MIR1273F-201ENST00000580581 99 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC092960.1-201ENST00000604762 351 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC078880.4-201ENST00000617627 1749 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 ELOBP4-201ENST00000423418 296 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC134879.1-201ENST00000426062 394 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 RPL29P7-201ENST00000440227 457 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 MED28P7-201ENST00000456611 530 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 WBP1LP1-201ENST00000460451 896 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC135721.2-201ENST00000464237 300 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 RN7SL259P-201ENST00000478499 253 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 RN7SL563P-201ENST00000481233 298 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 RPS4XP23-201ENST00000487801 237 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 RN7SL143P-201ENST00000496780 297 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 RPL5P11-201ENST00000498068 893 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 TECRP2-201ENST00000503270 928 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 SCARNA6-201ENST00000515982 265 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 OR4C1P-201ENST00000530880 937 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AL132640.2-202ENST00000559732 614 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC023827.2-201ENST00000566880 1061 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 RN7SL697P-201ENST00000582484 299 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AL031429.2-201ENST00000602605 649 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AC092032.1-201ENST00000603090 165 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 CYCSP1-201ENST00000604815 315 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AL513218.1-201ENST00000606527 391 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AL596275.2-208ENST00000641192 594 ntBASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms