Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNGA1P29973 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNGA1P29973 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC8.21□□□□□ -1.1
CNGA1P29973 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CNGA1P29973 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CNGA1P29973 GABARAPL3-201ENST00000412799 354 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC8.21□□□□□ -1.1
CNGA1P29973 MAPRE1P3-201ENST00000435438 796 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.21□□□□□ -1.1
CNGA1P29973 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.21□□□□□ -1.1
CNGA1P29973 AL034369.1-201ENST00000453808 477 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 AC091982.1-202ENST00000473923 343 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC8.21□□□□□ -1.1
CNGA1P29973 AC112184.1-201ENST00000505179 312 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.21□□□□□ -1.1
CNGA1P29973 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.21□□□□□ -1.1
CNGA1P29973 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.21□□□□□ -1.1
CNGA1P29973 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC8.21□□□□□ -1.1
CNGA1P29973 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
CNGA1P29973 AC096586.2-201ENST00000610260 441 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 AC099667.1-201ENST00000624222 469 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 TMEM14EP-202ENST00000639378 1296 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 CASC19-208ENST00000641056 1292 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 CASC19-227ENST00000641411 1285 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNGA1P29973 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.21□□□□□ -1.1
CNGA1P29973 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.21□□□□□ -1.1
CNGA1P29973 AP003119.3-201ENST00000566747 4192 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CNGA1P29973 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.21□□□□□ -1.1
CNGA1P29973 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNGA1P29973 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC8.21□□□□□ -1.1
CNGA1P29973 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNGA1P29973 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNGA1P29973 AL353763.1-201ENST00000624467 1628 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
CNGA1P29973 CCDC150P1-201ENST00000537123 2215 ntBASIC8.21□□□□□ -1.1
CNGA1P29973 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.21□□□□□ -1.1
CNGA1P29973 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CNGA1P29973 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.2□□□□□ -1.1
CNGA1P29973 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
CNGA1P29973 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CNGA1P29973 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CNGA1P29973 FTO-203ENST00000460382 1517 ntTSL 5 BASIC8.2□□□□□ -1.1
CNGA1P29973 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
CNGA1P29973 AC006116.1-201ENST00000587908 2171 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.2□□□□□ -1.1
CNGA1P29973 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.2□□□□□ -1.1
CNGA1P29973 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 Y_RNA.62-201ENST00000362840 99 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 RN7SKP55-201ENST00000364888 307 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 MIR575-201ENST00000385013 94 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 AL607077.1-201ENST00000401718 499 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 AC013268.2-201ENST00000420753 337 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC8.2□□□□□ -1.1
CNGA1P29973 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC8.2□□□□□ -1.1
CNGA1P29973 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC8.2□□□□□ -1.1
CNGA1P29973 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC8.2□□□□□ -1.1
CNGA1P29973 RN7SL153P-201ENST00000486501 292 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 NREP-217ENST00000509025 987 ntTSL 3 BASIC8.2□□□□□ -1.1
CNGA1P29973 APOBEC3AP1-201ENST00000511396 287 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 GCSHP1-201ENST00000512554 484 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 NREP-223ENST00000515855 801 ntTSL 4 BASIC8.2□□□□□ -1.1
CNGA1P29973 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC8.2□□□□□ -1.1
CNGA1P29973 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.2□□□□□ -1.1
CNGA1P29973 RN7SL366P-201ENST00000577957 292 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.2□□□□□ -1.1
CNGA1P29973 AC097381.3-201ENST00000608962 462 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.2□□□□□ -1.1
CNGA1P29973 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC8.2□□□□□ -1.1
CNGA1P29973 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.2□□□□□ -1.1
CNGA1P29973 AC025162.2-201ENST00000619602 560 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 AC017037.4-201ENST00000624526 826 ntBASIC8.2□□□□□ -1.1
CNGA1P29973 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.2□□□□□ -1.1
CNGA1P29973 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CNGA1P29973 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CNGA1P29973 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.2□□□□□ -1.1
CNGA1P29973 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.2□□□□□ -1.1
CNGA1P29973 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
CNGA1P29973 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CNGA1P29973 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.2□□□□□ -1.1
CNGA1P29973 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNGA1P29973 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.19□□□□□ -1.1
CNGA1P29973 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 SALL4P7-201ENST00000555779 3120 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 AP003471.1-202ENST00000319051 1988 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms