Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC092427.1-201ENST00000439177 601 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 WDR82P2-201ENST00000444540 928 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC242426.2-201ENST00000446956 795 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 DBIL5P-202ENST00000453414 250 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC103563.4-201ENST00000454384 368 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC008481.2-201ENST00000483614 531 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 NCOR1P1-202ENST00000486162 291 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC084024.2-201ENST00000503480 791 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 MTCO1P40-201ENST00000574371 625 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 WBP1LP12-201ENST00000604449 331 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC018714.1-201ENST00000605028 208 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AL121928.1-201ENST00000608017 521 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AL008582.1-201ENST00000609612 442 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 TEX41-256ENST00000626411 368 ntTSL 5 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCUBE3Q8IX30 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 IL6STP1-201ENST00000346911 1020 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 RNU6-500P-201ENST00000362349 107 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 CENPW-202ENST00000368326 443 ntTSL 2 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 BEND6-201ENST00000370745 579 ntTSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 MOSPD1-201ENST00000370777 784 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 DNAJA1P3-201ENST00000399417 1194 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 RNA5SP221-201ENST00000411271 103 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AC009319.1-201ENST00000411493 754 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 PAICSP7-201ENST00000419829 962 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 RPL21P32-201ENST00000419877 477 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 KANSL2-201ENST00000420613 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AL022400.1-201ENST00000423946 935 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 IGBP1P5-201ENST00000507524 1000 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 SETP21-201ENST00000514799 892 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AC022832.1-201ENST00000530718 645 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 OR4A40P-201ENST00000533878 948 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 RN7SL670P-201ENST00000577235 294 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 VN1R81P-201ENST00000602085 372 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 Y_RNA.812-201ENST00000610788 101 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 Y_RNA.784-201ENST00000613803 101 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 Y_RNA.787-201ENST00000616522 101 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AC002553.4-201ENST00000616896 331 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 Y_RNA.780-201ENST00000617336 101 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 Y_RNA.801-201ENST00000619005 101 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms