Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RN7SL776P-201ENST00000493390 268 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 TECRP2-201ENST00000503270 928 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC021220.1-201ENST00000507445 630 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC111000.1-201ENST00000514545 713 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 SCARNA18.2-201ENST00000516882 84 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC007537.1-201ENST00000539347 327 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC006120.1-201ENST00000579375 546 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 RN7SL42P-201ENST00000579786 294 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AP002345.2-201ENST00000609961 904 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC020658.4-201ENST00000613987 684 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC012629.3-201ENST00000623397 328 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.84□□□□□ -1.32
ZNF549Q6P9A3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
ZNF549Q6P9A3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
ZNF549Q6P9A3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.84□□□□□ -1.32
ZNF549Q6P9A3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
ZNF549Q6P9A3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.84□□□□□ -1.32
ZNF549Q6P9A3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
ZNF549Q6P9A3 AC062029.1-202ENST00000606164 3651 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 ATP5BP1-201ENST00000411980 1574 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AL359263.1-201ENST00000441188 2796 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC102941.1-201ENST00000567616 1537 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 RNA5SP53-201ENST00000391299 120 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 SOD1P1-201ENST00000407803 440 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 TPTE2P1-204ENST00000435256 593 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC087272.1-201ENST00000523624 533 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 SSU72P6-201ENST00000532644 488 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 NF1P12-201ENST00000549593 583 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AL135978.1-201ENST00000553618 1266 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AL450226.2-201ENST00000622913 439 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC008626.2-201ENST00000624425 248 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC073263.3-201ENST00000624449 858 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC026108.1-201ENST00000635444 547 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC093278.2-201ENST00000564956 2485 ntBASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.83□□□□□ -1.32
ZNF549Q6P9A3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.82□□□□□ -1.32
ZNF549Q6P9A3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
ZNF549Q6P9A3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ZNF549Q6P9A3 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ZNF549Q6P9A3 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
ZNF549Q6P9A3 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC6.82□□□□□ -1.32
ZNF549Q6P9A3 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.82□□□□□ -1.32
ZNF549Q6P9A3 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms