Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC4.77□□□□□ -1.65
RPL39P62891 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 CDY19P-201ENST00000411668 1613 ntBASIC4.77□□□□□ -1.65
RPL39P62891 CDY18P-201ENST00000438294 1609 ntBASIC4.77□□□□□ -1.65
RPL39P62891 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 FAM32BP-201ENST00000344033 333 ntBASIC4.77□□□□□ -1.65
RPL39P62891 STAG3L4-201ENST00000352103 530 ntBASIC4.77□□□□□ -1.65
RPL39P62891 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 RNU4-64P-201ENST00000410795 131 ntBASIC4.77□□□□□ -1.65
RPL39P62891 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC4.77□□□□□ -1.65
RPL39P62891 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC4.77□□□□□ -1.65
RPL39P62891 AC009237.4-201ENST00000441078 238 ntBASIC4.77□□□□□ -1.65
RPL39P62891 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC4.77□□□□□ -1.65
RPL39P62891 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 AC018892.2-201ENST00000457656 693 ntBASIC4.77□□□□□ -1.65
RPL39P62891 RN7SL392P-201ENST00000473024 299 ntBASIC4.77□□□□□ -1.65
RPL39P62891 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC4.77□□□□□ -1.65
RPL39P62891 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC4.77□□□□□ -1.65
RPL39P62891 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC4.77□□□□□ -1.65
RPL39P62891 AC025252.2-201ENST00000537470 502 ntBASIC4.77□□□□□ -1.65
RPL39P62891 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
RPL39P62891 DPPA3P2-201ENST00000553589 478 ntBASIC4.77□□□□□ -1.65
RPL39P62891 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 AL109628.1-201ENST00000556877 366 ntBASIC4.77□□□□□ -1.65
RPL39P62891 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC4.77□□□□□ -1.65
RPL39P62891 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RPL39P62891 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC4.77□□□□□ -1.65
RPL39P62891 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RPL39P62891 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC4.77□□□□□ -1.65
RPL39P62891 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC4.77□□□□□ -1.65
RPL39P62891 RPL17P3-201ENST00000605695 525 ntBASIC4.77□□□□□ -1.65
RPL39P62891 MIR6751-201ENST00000610479 63 ntBASIC4.77□□□□□ -1.65
RPL39P62891 AC245407.2-201ENST00000614199 451 ntBASIC4.77□□□□□ -1.65
RPL39P62891 Six3os1_1.1-201ENST00000620900 87 ntBASIC4.77□□□□□ -1.65
RPL39P62891 AC025287.2-201ENST00000621911 668 ntBASIC4.77□□□□□ -1.65
RPL39P62891 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC4.77□□□□□ -1.65
RPL39P62891 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RPL39P62891 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.77□□□□□ -1.65
RPL39P62891 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
RPL39P62891 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
RPL39P62891 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 FTO-215ENST00000636491 1676 ntTSL 5 BASIC4.77□□□□□ -1.65
RPL39P62891 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RPL39P62891 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
RPL39P62891 AC079753.1-201ENST00000623243 3868 ntBASIC4.76□□□□□ -1.65
RPL39P62891 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RPL39P62891 SLC9B1P3-201ENST00000452667 1334 ntBASIC4.76□□□□□ -1.65
RPL39P62891 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
RPL39P62891 AC106872.6-201ENST00000514228 1346 ntBASIC4.76□□□□□ -1.65
RPL39P62891 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
RPL39P62891 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC4.76□□□□□ -1.65
RPL39P62891 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 RNA5SP396-201ENST00000364834 120 ntBASIC4.76□□□□□ -1.65
RPL39P62891 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 SNORA70H-201ENST00000383910 135 ntBASIC4.76□□□□□ -1.65
RPL39P62891 SNORA70J-201ENST00000384182 135 ntBASIC4.76□□□□□ -1.65
RPL39P62891 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC4.76□□□□□ -1.65
RPL39P62891 OR4F7P-201ENST00000402444 931 ntBASIC4.76□□□□□ -1.65
RPL39P62891 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RPL39P62891 OR4F1P-201ENST00000405102 938 ntBASIC4.76□□□□□ -1.65
RPL39P62891 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC4.76□□□□□ -1.65
RPL39P62891 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC4.76□□□□□ -1.65
RPL39P62891 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC4.76□□□□□ -1.65
RPL39P62891 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC4.76□□□□□ -1.65
RPL39P62891 OR4F2P-201ENST00000424047 938 ntBASIC4.76□□□□□ -1.65
RPL39P62891 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC4.76□□□□□ -1.65
RPL39P62891 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC4.76□□□□□ -1.65
RPL39P62891 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC4.76□□□□□ -1.65
RPL39P62891 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 CICP10-201ENST00000439497 198 ntBASIC4.76□□□□□ -1.65
RPL39P62891 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC4.76□□□□□ -1.65
RPL39P62891 RPL21P33-201ENST00000444831 484 ntBASIC4.76□□□□□ -1.65
RPL39P62891 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPL39P62891 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC4.76□□□□□ -1.65
RPL39P62891 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms