Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC8.26□□□□□ -1.09
RHBDL3P58872 HMGB3P14-201ENST00000494195 599 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC8.26□□□□□ -1.09
RHBDL3P58872 AP006587.5-201ENST00000532033 739 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.26□□□□□ -1.09
RHBDL3P58872 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC8.26□□□□□ -1.09
RHBDL3P58872 NXPE2P1-201ENST00000543705 726 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC8.26□□□□□ -1.09
RHBDL3P58872 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC8.26□□□□□ -1.09
RHBDL3P58872 AC107993.1-201ENST00000591343 684 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.26□□□□□ -1.09
RHBDL3P58872 NF1P10-201ENST00000613227 742 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 AC061999.1-201ENST00000624454 177 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 AC063952.1-203ENST00000634410 658 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RHBDL3P58872 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
RHBDL3P58872 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 AC122713.2-201ENST00000624942 3335 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
RHBDL3P58872 AC009135.2-201ENST00000624136 1768 ntBASIC8.25□□□□□ -1.09
RHBDL3P58872 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
RHBDL3P58872 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
RHBDL3P58872 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.25□□□□□ -1.09
RHBDL3P58872 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
RHBDL3P58872 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
RHBDL3P58872 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RHBDL3P58872 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RHBDL3P58872 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RHBDL3P58872 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RHBDL3P58872 RNA5SP308-201ENST00000362532 115 ntBASIC8.25□□□□□ -1.09
RHBDL3P58872 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RHBDL3P58872 AC013268.2-201ENST00000420753 337 ntBASIC8.25□□□□□ -1.09
RHBDL3P58872 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.25□□□□□ -1.09
RHBDL3P58872 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
RHBDL3P58872 AL031681.1-201ENST00000443304 400 ntBASIC8.25□□□□□ -1.09
RHBDL3P58872 AC004890.1-201ENST00000461005 181 ntBASIC8.25□□□□□ -1.09
RHBDL3P58872 RN7SL654P-201ENST00000479178 292 ntBASIC8.25□□□□□ -1.09
RHBDL3P58872 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.25□□□□□ -1.09
RHBDL3P58872 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC8.25□□□□□ -1.09
RHBDL3P58872 AC116917.1-201ENST00000520558 305 ntBASIC8.25□□□□□ -1.09
RHBDL3P58872 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC8.25□□□□□ -1.09
RHBDL3P58872 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC8.25□□□□□ -1.09
RHBDL3P58872 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC8.25□□□□□ -1.09
RHBDL3P58872 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.25□□□□□ -1.09
RHBDL3P58872 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC8.25□□□□□ -1.09
RHBDL3P58872 AC010463.3-201ENST00000594077 500 ntBASIC8.25□□□□□ -1.09
RHBDL3P58872 RPL7AP69-201ENST00000595306 806 ntBASIC8.25□□□□□ -1.09
RHBDL3P58872 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC8.25□□□□□ -1.09
RHBDL3P58872 MIR6780B-201ENST00000610307 79 ntBASIC8.25□□□□□ -1.09
RHBDL3P58872 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.25□□□□□ -1.09
RHBDL3P58872 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RHBDL3P58872 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
RHBDL3P58872 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
RHBDL3P58872 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.25□□□□□ -1.09
RHBDL3P58872 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RHBDL3P58872 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.25□□□□□ -1.09
RHBDL3P58872 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.25□□□□□ -1.09
RHBDL3P58872 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
RHBDL3P58872 AC018992.1-201ENST00000523778 2149 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.24□□□□□ -1.09
RHBDL3P58872 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.24□□□□□ -1.09
RHBDL3P58872 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.24□□□□□ -1.09
RHBDL3P58872 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.24□□□□□ -1.09
RHBDL3P58872 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.24□□□□□ -1.09
RHBDL3P58872 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC8.24□□□□□ -1.09
RHBDL3P58872 SNORA7A-201ENST00000384765 139 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 AC099535.1-201ENST00000408928 371 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.24□□□□□ -1.09
RHBDL3P58872 AC128677.1-201ENST00000436016 442 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RHBDL3P58872 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC8.24□□□□□ -1.09
RHBDL3P58872 OR52E7P-201ENST00000452394 933 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 AC044810.1-201ENST00000480271 711 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 RN7SL741P-201ENST00000482473 289 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.24□□□□□ -1.09
RHBDL3P58872 AC138517.1-201ENST00000515724 568 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC8.24□□□□□ -1.09
RHBDL3P58872 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC8.24□□□□□ -1.09
RHBDL3P58872 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC8.24□□□□□ -1.09
RHBDL3P58872 AC007255.2-201ENST00000604053 631 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 AC087468.1-201ENST00000604365 630 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 AC009779.8-202ENST00000607990 932 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 AC127071.2-201ENST00000623293 527 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.24□□□□□ -1.09
RHBDL3P58872 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
RHBDL3P58872 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms