Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL1P09341 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL1P09341 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
CXCL1P09341 AL137190.1-201ENST00000603288 282 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AC097467.4-201ENST00000605504 141 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AL136304.1-201ENST00000607790 509 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AL731533.2-201ENST00000607898 578 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL1P09341 RN7SL3-201ENST00000610674 299 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AL121809.2-201ENST00000613169 341 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC5.27□□□□□ -1.57
CXCL1P09341 AL731556.2-201ENST00000615610 770 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AL109924.4-201ENST00000623089 670 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 CU638689.2-201ENST00000623809 818 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AL162377.2-201ENST00000624532 337 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.27□□□□□ -1.57
CXCL1P09341 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL1P09341 CR589904.1-203ENST00000636515 318 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL1P09341 AP002833.3-201ENST00000625075 2265 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL1P09341 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL1P09341 AL157713.1-201ENST00000379752 1531 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL1P09341 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.27□□□□□ -1.57
CXCL1P09341 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.27□□□□□ -1.57
CXCL1P09341 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.27□□□□□ -1.57
CXCL1P09341 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
CXCL1P09341 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.27□□□□□ -1.57
CXCL1P09341 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CXCL1P09341 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL1P09341 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL1P09341 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL1P09341 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL1P09341 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL1P09341 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CXCL1P09341 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 RNA5SP378-201ENST00000363646 120 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 RN7SKP118-201ENST00000364331 330 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 AC004129.1-201ENST00000417617 796 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC5.26□□□□□ -1.57
CXCL1P09341 NME1P1-201ENST00000420914 382 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL1P09341 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 AL122003.1-201ENST00000435206 784 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 EFCAB14P1-201ENST00000442409 463 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 EAF2-202ENST00000451944 960 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL1P09341 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL1P09341 GAPDHP31-201ENST00000509325 1014 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL1P09341 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 AC068790.1-201ENST00000536166 355 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 AC243312.1-201ENST00000570582 275 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 AC009171.1-201ENST00000572673 266 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC5.26□□□□□ -1.57
CXCL1P09341 AC211469.1-201ENST00000604263 394 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 AC025171.4-201ENST00000607250 1047 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL1P09341 uc_338.21-201ENST00000622458 147 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.26□□□□□ -1.57
CXCL1P09341 AC007485.2-201ENST00000623493 1667 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 AC004014.2-201ENST00000623718 5122 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL1P09341 EEF1A1P22-201ENST00000559385 1380 ntBASIC5.26□□□□□ -1.57
CXCL1P09341 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
CXCL1P09341 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL1P09341 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 AL512353.3-201ENST00000417517 1326 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC5.25□□□□□ -1.57
CXCL1P09341 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL1P09341 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms