Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 AL512625.2-201ENST00000417533 625 ntBASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.72■□□□□ 0.59
YIPF4Q9BSR8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 PTBP1P-201ENST00000554374 1601 ntBASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 AF201337.1-201ENST00000520239 748 ntBASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 AL121832.2-201ENST00000610979 668 ntBASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 AL589743.5-201ENST00000616611 1050 ntBASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF4Q9BSR8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.71■□□□□ 0.58
YIPF4Q9BSR8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 MKRN4P-201ENST00000444706 1521 ntBASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 AC133552.2-202ENST00000575694 574 ntBASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF4Q9BSR8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF4Q9BSR8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF4Q9BSR8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF4Q9BSR8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF4Q9BSR8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF4Q9BSR8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF4Q9BSR8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF4Q9BSR8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms