Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 PHGDH-210ENST00000641115 1638 ntBASIC31.13■■■□□ 2.57
FYCO1Q9BQS8 KRT8P9-201ENST00000558927 1449 ntBASIC31.13■■■□□ 2.57
FYCO1Q9BQS8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
FYCO1Q9BQS8 RCN1P1-201ENST00000400413 996 ntBASIC31.13■■■□□ 2.57
FYCO1Q9BQS8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC31.13■■■□□ 2.57
FYCO1Q9BQS8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
FYCO1Q9BQS8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
FYCO1Q9BQS8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
FYCO1Q9BQS8 AP006587.1-201ENST00000534129 1502 ntBASIC31.13■■■□□ 2.57
FYCO1Q9BQS8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
FYCO1Q9BQS8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
FYCO1Q9BQS8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
FYCO1Q9BQS8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC31.12■■■□□ 2.57
FYCO1Q9BQS8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
FYCO1Q9BQS8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC31.12■■■□□ 2.57
FYCO1Q9BQS8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
FYCO1Q9BQS8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC31.12■■■□□ 2.57
FYCO1Q9BQS8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
FYCO1Q9BQS8 AP000525.1-201ENST00000608286 694 ntBASIC31.11■■■□□ 2.57
FYCO1Q9BQS8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
FYCO1Q9BQS8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
FYCO1Q9BQS8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
FYCO1Q9BQS8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
FYCO1Q9BQS8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
FYCO1Q9BQS8 KRT16P6-202ENST00000425692 1426 ntBASIC31.11■■■□□ 2.57
FYCO1Q9BQS8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC31.11■■■□□ 2.57
FYCO1Q9BQS8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 AL445675.2-201ENST00000620291 557 ntBASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
FYCO1Q9BQS8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
FYCO1Q9BQS8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC31.09■■■□□ 2.57
FYCO1Q9BQS8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
FYCO1Q9BQS8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC31.09■■■□□ 2.57
FYCO1Q9BQS8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
FYCO1Q9BQS8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
FYCO1Q9BQS8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
FYCO1Q9BQS8 MESTP1-201ENST00000404287 994 ntBASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 BX119927.1-201ENST00000636596 1552 ntBASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
FYCO1Q9BQS8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 UNC93B2-201ENST00000285383 730 ntBASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 AC145285.6-201ENST00000604632 637 ntBASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 ABBA01031674.1-201ENST00000635145 728 ntBASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
FYCO1Q9BQS8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
FYCO1Q9BQS8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
FYCO1Q9BQS8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
FYCO1Q9BQS8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC31.05■■■□□ 2.56
FYCO1Q9BQS8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
FYCO1Q9BQS8 MIR6786-201ENST00000616843 113 ntBASIC31.05■■■□□ 2.56
FYCO1Q9BQS8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC31.05■■■□□ 2.56
FYCO1Q9BQS8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC31.05■■■□□ 2.56
FYCO1Q9BQS8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
FYCO1Q9BQS8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC31.05■■■□□ 2.56
FYCO1Q9BQS8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC31.04■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms