Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRAF3IP1Q8TDR0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 AL691432.2-201ENST00000607222 2038 ntBASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP1Q8TDR0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAF3IP1Q8TDR0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 KRT8P20-201ENST00000423953 1409 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 KRT8P17-201ENST00000453110 1448 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 PTBP1P-201ENST00000554374 1601 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 MIR663A-201ENST00000385250 93 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 LSM12P1-201ENST00000411836 588 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 CDCA4P2-201ENST00000441182 718 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 AC026185.1-201ENST00000445748 174 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 AC133552.2-202ENST00000575694 574 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 AL031963.3-201ENST00000606441 850 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms