Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB1Q86U70 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.9■□□□□ 0.78
LDB1Q86U70 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LDB1Q86U70 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.89■□□□□ 0.78
LDB1Q86U70 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB1Q86U70 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB1Q86U70 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LDB1Q86U70 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LDB1Q86U70 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB1Q86U70 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.89■□□□□ 0.77
LDB1Q86U70 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LDB1Q86U70 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LDB1Q86U70 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.89■□□□□ 0.77
LDB1Q86U70 KRT8P20-201ENST00000423953 1409 ntBASIC19.89■□□□□ 0.77
LDB1Q86U70 DUSP5P2-201ENST00000426873 1033 ntBASIC19.89■□□□□ 0.77
LDB1Q86U70 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.89■□□□□ 0.77
LDB1Q86U70 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LDB1Q86U70 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LDB1Q86U70 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.89■□□□□ 0.77
LDB1Q86U70 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.89■□□□□ 0.77
LDB1Q86U70 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.89■□□□□ 0.77
LDB1Q86U70 AL031963.3-201ENST00000606441 850 ntBASIC19.89■□□□□ 0.77
LDB1Q86U70 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LDB1Q86U70 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB1Q86U70 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB1Q86U70 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB1Q86U70 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB1Q86U70 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LDB1Q86U70 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LDB1Q86U70 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB1Q86U70 SLC29A4P1-201ENST00000398760 971 ntBASIC19.88■□□□□ 0.77
LDB1Q86U70 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB1Q86U70 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.88■□□□□ 0.77
LDB1Q86U70 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.88■□□□□ 0.77
LDB1Q86U70 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB1Q86U70 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB1Q86U70 AC098934.4-201ENST00000564127 592 ntBASIC19.88■□□□□ 0.77
LDB1Q86U70 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
LDB1Q86U70 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LDB1Q86U70 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.88■□□□□ 0.77
LDB1Q86U70 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB1Q86U70 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB1Q86U70 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LDB1Q86U70 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB1Q86U70 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
LDB1Q86U70 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB1Q86U70 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB1Q86U70 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.88■□□□□ 0.77
LDB1Q86U70 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LDB1Q86U70 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB1Q86U70 AL158211.5-201ENST00000623583 2518 ntBASIC19.87■□□□□ 0.77
LDB1Q86U70 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.87■□□□□ 0.77
LDB1Q86U70 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LDB1Q86U70 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LDB1Q86U70 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.87■□□□□ 0.77
LDB1Q86U70 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.87■□□□□ 0.77
LDB1Q86U70 AL138781.1-201ENST00000566567 1274 ntBASIC19.87■□□□□ 0.77
LDB1Q86U70 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.87■□□□□ 0.77
LDB1Q86U70 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.87■□□□□ 0.77
LDB1Q86U70 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LDB1Q86U70 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LDB1Q86U70 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB1Q86U70 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.86■□□□□ 0.77
LDB1Q86U70 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LDB1Q86U70 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.86■□□□□ 0.77
LDB1Q86U70 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.86■□□□□ 0.77
LDB1Q86U70 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LDB1Q86U70 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LDB1Q86U70 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LDB1Q86U70 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDB1Q86U70 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB1Q86U70 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB1Q86U70 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB1Q86U70 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB1Q86U70 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms