Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 AC140113.2-201ENST00000604370 208 ntBASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 MIR564-202ENST00000385049 94 ntBASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 AC004980.1-204ENST00000429707 299 ntBASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 AC091304.2-201ENST00000564639 760 ntBASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 AL691403.2-201ENST00000618460 490 ntBASIC21.74■■□□□ 1.07
PRPF38BQ5VTL8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 AC005104.2-201ENST00000427818 678 ntBASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 TSPY17P-201ENST00000450329 467 ntBASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 C1QL1P1-201ENST00000568105 661 ntBASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 AL121772.3-201ENST00000610840 674 ntBASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
PRPF38BQ5VTL8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 HTR5BP-201ENST00000430851 1154 ntBASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 AC096733.2-201ENST00000609937 1394 ntBASIC21.72■■□□□ 1.07
PRPF38BQ5VTL8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 STARP1-201ENST00000397973 869 ntBASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 AC131212.4-201ENST00000623606 975 ntBASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF38BQ5VTL8 AC022211.4-201ENST00000625094 2161 ntBASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
PRPF38BQ5VTL8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms