Protein–RNA interactions for Protein: Q08831

VTS1, Protein VTS1, yeastyeast

Known RBP RIP-Chip data

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTS1Q08831 BUL2YML111W 2763 nt1.11□□□□□ -2.23
VTS1Q08831 SIP4YJL089W 2490 nt1.11□□□□□ -2.23
VTS1Q08831 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
VTS1Q08831 snR64snR64 101 nt1.08□□□□□ -2.24
VTS1Q08831 PAU12YGR294W 363 nt1.06□□□□□ -2.24
VTS1Q08831 YJR029WYJR029W 5268 nt1.06□□□□□ -2.24
VTS1Q08831 YPR137C-BYPR137C-B 5268 nt1.06□□□□□ -2.24
VTS1Q08831 YPR117WYPR117W 7470 nt1.04□□□□□ -2.24
VTS1Q08831 SCC2YDR180W 4482 nt1.03□□□□□ -2.24
VTS1Q08831 RKR1YMR247C 4689 nt1.02□□□□□ -2.25
VTS1Q08831 YHR180C-BYHR180C-B 105 nt1.02□□□□□ -2.25
VTS1Q08831 YML054C-AYML054C-A 159 nt1.02□□□□□ -2.25
VTS1Q08831 YKL225WYKL225W 348 nt1□□□□□ -2.25
VTS1Q08831 LTE1YAL024C 4308 nt1□□□□□ -2.25
VTS1Q08831 YBR109W-AYBR109W-A 225 nt0.99□□□□□ -2.25
VTS1Q08831 tQ(UUG)QtQ(UUG)Q 76 nt0.98□□□□□ -2.25
VTS1Q08831 VAM6YDL077C 3150 nt0.97□□□□□ -2.25
VTS1Q08831 IML1YJR138W 4755 nt0.97□□□□□ -2.25
VTS1Q08831 RPL41AYDL184C 78 nt0.96□□□□□ -2.26
VTS1Q08831 YOR192C-BYOR192C-B 5313 nt0.96□□□□□ -2.26
VTS1Q08831 YBR296C-AYBR296C-A 120 nt0.94□□□□□ -2.26
VTS1Q08831 tH(GUG)E1tH(GUG)E1 72 nt0.93□□□□□ -2.26
VTS1Q08831 tH(GUG)E2tH(GUG)E2 72 nt0.93□□□□□ -2.26
VTS1Q08831 tH(GUG)G1tH(GUG)G1 72 nt0.93□□□□□ -2.26
VTS1Q08831 tH(GUG)G2tH(GUG)G2 72 nt0.93□□□□□ -2.26
VTS1Q08831 tH(GUG)HtH(GUG)H 72 nt0.93□□□□□ -2.26
VTS1Q08831 tH(GUG)KtH(GUG)K 72 nt0.93□□□□□ -2.26
VTS1Q08831 tH(GUG)MtH(GUG)M 72 nt0.93□□□□□ -2.26
VTS1Q08831 YDR371C-AYDR371C-A 105 nt0.92□□□□□ -2.26
VTS1Q08831 YER090C-AYER090C-A 90 nt0.92□□□□□ -2.26
VTS1Q08831 snR50snR50 90 nt0.92□□□□□ -2.26
VTS1Q08831 PET111YMR257C 2403 nt0.9□□□□□ -2.26
VTS1Q08831 snR38snR38 95 nt0.9□□□□□ -2.27
VTS1Q08831 YNL054W-BYNL054W-B 5250 nt0.89□□□□□ -2.27
VTS1Q08831 tV(UAC)BtV(UAC)B 74 nt0.89□□□□□ -2.27
VTS1Q08831 tV(UAC)DtV(UAC)D 74 nt0.89□□□□□ -2.27
VTS1Q08831 EMT1tM(CAU)D 73 nt0.88□□□□□ -2.27
VTS1Q08831 EMT5tM(CAU)J1 73 nt0.88□□□□□ -2.27
VTS1Q08831 EMT3tM(CAU)J2 73 nt0.88□□□□□ -2.27
VTS1Q08831 EMT4tM(CAU)M 73 nt0.88□□□□□ -2.27
VTS1Q08831 EMT2tM(CAU)O2 73 nt0.88□□□□□ -2.27
VTS1Q08831 DOP1YDR141C 5097 nt0.87□□□□□ -2.27
VTS1Q08831 PAU24YBR301W 363 nt0.86□□□□□ -2.27
VTS1Q08831 AI1Q0050 2505 nt0.85□□□□□ -2.27
VTS1Q08831 YBL100W-BYBL100W-B 5313 nt0.81□□□□□ -2.28
VTS1Q08831 MLP1YKR095W 5628 nt0.8□□□□□ -2.28
VTS1Q08831 MLP2YIL149C 5040 nt0.78□□□□□ -2.28
VTS1Q08831 BEM2YER155C 6504 nt0.78□□□□□ -2.28
VTS1Q08831 IQG1YPL242C 4488 nt0.77□□□□□ -2.29
VTS1Q08831 SKI7YOR076C 2244 nt0.76□□□□□ -2.29
VTS1Q08831 snR67snR67 82 nt0.75□□□□□ -2.29
VTS1Q08831 YDL159W-AYDL159W-A 132 nt0.72□□□□□ -2.29
VTS1Q08831 YMR160WYMR160W 2451 nt0.7□□□□□ -2.3
VTS1Q08831 YLR149C-AYLR149C-A 87 nt0.69□□□□□ -2.3
VTS1Q08831 MYO1YHR023W 5787 nt0.67□□□□□ -2.3
VTS1Q08831 YGR122C-AYGR122C-A 129 nt0.65□□□□□ -2.31
VTS1Q08831 tF(GAA)BtF(GAA)B 73 nt0.64□□□□□ -2.31
VTS1Q08831 tF(GAA)FtF(GAA)F 73 nt0.64□□□□□ -2.31
VTS1Q08831 tF(GAA)GtF(GAA)G 73 nt0.64□□□□□ -2.31
VTS1Q08831 tF(GAA)H1tF(GAA)H1 73 nt0.64□□□□□ -2.31
VTS1Q08831 tF(GAA)H2tF(GAA)H2 73 nt0.64□□□□□ -2.31
VTS1Q08831 tF(GAA)MtF(GAA)M 73 nt0.64□□□□□ -2.31
VTS1Q08831 tF(GAA)P1tF(GAA)P1 73 nt0.64□□□□□ -2.31
VTS1Q08831 tF(GAA)P2tF(GAA)P2 73 nt0.64□□□□□ -2.31
VTS1Q08831 YOR186C-AYOR186C-A 210 nt0.64□□□□□ -2.31
VTS1Q08831 YPR159C-AYPR159C-A 102 nt0.63□□□□□ -2.31
VTS1Q08831 UTP20YBL004W 7482 nt0.63□□□□□ -2.31
VTS1Q08831 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
VTS1Q08831 YKL096C-BYKL096C-B 150 nt0.6□□□□□ -2.31
VTS1Q08831 YML100W-AYML100W-A 174 nt0.53□□□□□ -2.32
VTS1Q08831 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
VTS1Q08831 YOL014WYOL014W 375 nt0.51□□□□□ -2.33
VTS1Q08831 tT(AGU)BtT(AGU)B 73 nt0.5□□□□□ -2.33
VTS1Q08831 tT(AGU)CtT(AGU)C 73 nt0.5□□□□□ -2.33
VTS1Q08831 tT(AGU)DtT(AGU)D 73 nt0.5□□□□□ -2.33
VTS1Q08831 tT(AGU)HtT(AGU)H 73 nt0.5□□□□□ -2.33
VTS1Q08831 tT(AGU)I1tT(AGU)I1 73 nt0.5□□□□□ -2.33
VTS1Q08831 tT(AGU)I2tT(AGU)I2 73 nt0.5□□□□□ -2.33
VTS1Q08831 tT(AGU)JtT(AGU)J 73 nt0.5□□□□□ -2.33
VTS1Q08831 tT(AGU)N1tT(AGU)N1 73 nt0.5□□□□□ -2.33
VTS1Q08831 tT(AGU)N2tT(AGU)N2 73 nt0.5□□□□□ -2.33
VTS1Q08831 tT(AGU)O1tT(AGU)O1 73 nt0.5□□□□□ -2.33
VTS1Q08831 tT(AGU)O2tT(AGU)O2 73 nt0.5□□□□□ -2.33
VTS1Q08831 SOV1YMR066W 2697 nt0.48□□□□□ -2.33
VTS1Q08831 YKL106C-AYKL106C-A 120 nt0.48□□□□□ -2.33
VTS1Q08831 YKL145W-AYKL145W-A 93 nt0.48□□□□□ -2.33
VTS1Q08831 ESP1YGR098C 4893 nt0.47□□□□□ -2.33
VTS1Q08831 FMP27YLR454W 7887 nt0.46□□□□□ -2.34
VTS1Q08831 snR75snR75 89 nt0.35□□□□□ -2.35
VTS1Q08831 YDL114W-AYDL114W-A 114 nt0.35□□□□□ -2.35
VTS1Q08831 THO2YNL139C 4794 nt0.34□□□□□ -2.35
VTS1Q08831 YER078W-AYER078W-A 165 nt0.34□□□□□ -2.36
VTS1Q08831 YOL013W-AYOL013W-A 192 nt0.34□□□□□ -2.36
VTS1Q08831 snR128snR128 126 nt0.32□□□□□ -2.36
VTS1Q08831 tV(UAC)QtV(UAC)Q 76 nt0.3□□□□□ -2.36
VTS1Q08831 YOR376W-AYOR376W-A 156 nt0.3□□□□□ -2.36
VTS1Q08831 YOR316C-AYOR316C-A 210 nt0.25□□□□□ -2.37
VTS1Q08831 PAU9YBL108C-A 129 nt0.21□□□□□ -2.38
VTS1Q08831 SBH2YER019C-A 267 nt0.16□□□□□ -2.38
VTS1Q08831 snR77snR77 88 nt0.13□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 11.9 ms