Protein–RNA interactions for Protein: P89113

DDR2, Protein DDR2, yeast

Predictions only

Length 61 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
DDR2	P89113	MPC1	YGL080W	393 nt		-4.5	□□□□□ -3.13
DDR2	P89113	ATP6	Q0085	780 nt		-4.51	□□□□□ -3.13
DDR2	P89113	snR73	snR73	106 nt		-4.54	□□□□□ -3.14
DDR2	P89113	YHR180C-B	YHR180C-B	105 nt		-4.56	□□□□□ -3.14
DDR2	P89113	snR41	snR41	95 nt		-4.56	□□□□□ -3.14
DDR2	P89113	YJL150W	YJL150W	303 nt		-4.58	□□□□□ -3.14
DDR2	P89113	YOL038C-A	YOL038C-A	96 nt		-4.58	□□□□□ -3.14
DDR2	P89113	YKL106C-A	YKL106C-A	120 nt		-4.62	□□□□□ -3.15
DDR2	P89113	YOL013W-B	YOL013W-B	291 nt		-4.62	□□□□□ -3.15
DDR2	P89113	YLR299C-A	YLR299C-A	93 nt		-4.63	□□□□□ -3.15
DDR2	P89113	YOR335W-A	YOR335W-A	81 nt		-4.65	□□□□□ -3.15
DDR2	P89113	YOR381W-A	YOR381W-A	168 nt		-4.66	□□□□□ -3.16
DDR2	P89113	snR80	snR80	171 nt		-4.69	□□□□□ -3.16
DDR2	P89113	YNL198C	YNL198C	303 nt		-4.77	□□□□□ -3.17
DDR2	P89113	snR60	snR60	104 nt		-4.78	□□□□□ -3.17
DDR2	P89113	YAL016C-B	YAL016C-B	186 nt		-4.8	□□□□□ -3.18
DDR2	P89113	snR78	snR78	87 nt		-4.81	□□□□□ -3.18
DDR2	P89113	RPL41B	YDL133C-A	78 nt		-4.81	□□□□□ -3.18
DDR2	P89113	YDR413C	YDR413C	576 nt		-4.84	□□□□□ -3.18
DDR2	P89113	YOR329W-A	YOR329W-A	210 nt		-4.87	□□□□□ -3.19
DDR2	P89113	YGL041C	YGL041C	204 nt		-4.88	□□□□□ -3.19
DDR2	P89113	YNL324W	YNL324W	396 nt		-4.94	□□□□□ -3.2
DDR2	P89113	BIL1	YOR304C-A	231 nt		-4.98	□□□□□ -3.21
DDR2	P89113	YNL028W	YNL028W	318 nt		-4.99	□□□□□ -3.21
DDR2	P89113	YEL014C	YEL014C	306 nt		-5.01	□□□□□ -3.21
DDR2	P89113	YLR222C-A	YLR222C-A	231 nt		-5.03	□□□□□ -3.21
DDR2	P89113	snR34	snR34	203 nt		-5.04	□□□□□ -3.22
DDR2	P89113	YLR120W-A	YLR120W-A	102 nt		-5.08	□□□□□ -3.22
DDR2	P89113	YMR001C-A	YMR001C-A	231 nt		-5.08	□□□□□ -3.22
DDR2	P89113	YBR109W-A	YBR109W-A	225 nt		-5.11	□□□□□ -3.23
DDR2	P89113	Q0255	Q0255	1419 nt		-5.12	□□□□□ -3.23
DDR2	P89113	YLR434C	YLR434C	384 nt		-5.13	□□□□□ -3.23
DDR2	P89113	snR54	snR54	86 nt		-5.15	□□□□□ -3.23
DDR2	P89113	snR87	snR87	109 nt		-5.21	□□□□□ -3.24
DDR2	P89113	YOR102W	YOR102W	351 nt		-5.27	□□□□□ -3.25
DDR2	P89113	tW(UCA)Q	tW(UCA)Q	74 nt		-5.3	□□□□□ -3.26
DDR2	P89113	YER006C-A	YER006C-A	318 nt		-5.31	□□□□□ -3.26
DDR2	P89113	YGR035C	YGR035C	351 nt		-5.33	□□□□□ -3.26
DDR2	P89113	HTL1	YCR020W-B	237 nt		-5.4	□□□□□ -3.27
DDR2	P89113	YBR296C-A	YBR296C-A	120 nt		-5.45	□□□□□ -3.28
DDR2	P89113	YGL188C-A	YGL188C-A	141 nt		-5.47	□□□□□ -3.29
DDR2	P89113	RPL41A	YDL184C	78 nt		-5.52	□□□□□ -3.29
DDR2	P89113	snR48	snR48	113 nt		-5.56	□□□□□ -3.3
DDR2	P89113	YBR131C-A	YBR131C-A	90 nt		-5.58	□□□□□ -3.3
DDR2	P89113	YDR406W-A	YDR406W-A	246 nt		-5.59	□□□□□ -3.3
DDR2	P89113	snR38	snR38	95 nt		-5.61	□□□□□ -3.31
DDR2	P89113	YKL118W	YKL118W	312 nt		-5.62	□□□□□ -3.31
DDR2	P89113	YNL097C-B	YNL097C-B	123 nt		-5.62	□□□□□ -3.31
DDR2	P89113	GIM4	YEL003W	336 nt		-5.64	□□□□□ -3.31
DDR2	P89113	tL(UAA)Q	tL(UAA)Q	85 nt		-5.65	□□□□□ -3.31
DDR2	P89113	snR85	snR85	171 nt		-5.74	□□□□□ -3.33
DDR2	P89113	snR56	snR56	88 nt		-5.8	□□□□□ -3.34
DDR2	P89113	YLR412C-A	YLR412C-A	207 nt		-5.8	□□□□□ -3.34
DDR2	P89113	YAL066W	YAL066W	309 nt		-5.81	□□□□□ -3.34
DDR2	P89113	tF(GAA)Q	tF(GAA)Q	75 nt		-5.86	□□□□□ -3.35
DDR2	P89113	YJL136W-A	YJL136W-A	84 nt		-5.87	□□□□□ -3.35
DDR2	P89113	tV(UAC)Q	tV(UAC)Q	76 nt		-5.88	□□□□□ -3.35
DDR2	P89113	YPL038W-A	YPL038W-A	192 nt		-5.93	□□□□□ -3.36
DDR2	P89113	YDL114W-A	YDL114W-A	114 nt		-5.97	□□□□□ -3.37
DDR2	P89113	YCR095W-A	YCR095W-A	159 nt		-5.98	□□□□□ -3.37
DDR2	P89113	YNL122C	YNL122C	348 nt		-5.99	□□□□□ -3.37
DDR2	P89113	YAL063C-A	YAL063C-A	291 nt		-6.04	□□□□□ -3.38
DDR2	P89113	RPL39	YJL189W	156 nt		-6.05	□□□□□ -3.38
DDR2	P89113	YDR183C-A	YDR183C-A	258 nt		-6.13	□□□□□ -3.39
DDR2	P89113	YDR118W-A	YDR118W-A	117 nt		-6.15	□□□□□ -3.39
DDR2	P89113	YDR157W	YDR157W	402 nt		-6.16	□□□□□ -3.4
DDR2	P89113	YHL015W-A	YHL015W-A	84 nt		-6.18	□□□□□ -3.4
DDR2	P89113	snR58	snR58	96 nt		-6.21	□□□□□ -3.4
DDR2	P89113	YBL100W-C	YBL100W-C	120 nt		-6.28	□□□□□ -3.41
DDR2	P89113	YKL096C-B	YKL096C-B	150 nt		-6.3	□□□□□ -3.42
DDR2	P89113	YJL047C-A	YJL047C-A	135 nt		-6.33	□□□□□ -3.42
DDR2	P89113	YKL123W	YKL123W	381 nt		-6.35	□□□□□ -3.43
DDR2	P89113	YBL071C-B	YBL071C-B	99 nt		-6.37	□□□□□ -3.43
DDR2	P89113	YOL164W-A	YOL164W-A	183 nt		-6.37	□□□□□ -3.43
DDR2	P89113	SOM1	YEL059C-A	225 nt		-6.38	□□□□□ -3.43
DDR2	P89113	snR47	snR47	99 nt		-6.42	□□□□□ -3.44
DDR2	P89113	snR52	snR52	92 nt		-6.46	□□□□□ -3.44
DDR2	P89113	SPG3	YDR504C	384 nt		-6.51	□□□□□ -3.45
DDR2	P89113	YBL053W	YBL053W	375 nt		-6.52	□□□□□ -3.45
DDR2	P89113	YNL170W	YNL170W	396 nt		-6.59	□□□□□ -3.46
DDR2	P89113	YGR151C	YGR151C	336 nt		-6.62	□□□□□ -3.47
DDR2	P89113	YKL225W	YKL225W	348 nt		-6.64	□□□□□ -3.47
DDR2	P89113	YOR302W	YOR302W	78 nt		-6.64	□□□□□ -3.47
DDR2	P89113	YNL277W-A	YNL277W-A	189 nt		-6.67	□□□□□ -3.48
DDR2	P89113	YHR175W-A	YHR175W-A	150 nt		-6.7	□□□□□ -3.48
DDR2	P89113	YDL159W-A	YDL159W-A	132 nt		-6.74	□□□□□ -3.49
DDR2	P89113	YLR285C-A	YLR285C-A	171 nt		-6.84	□□□□□ -3.5
DDR2	P89113	YAL037C-A	YAL037C-A	93 nt		-6.91	□□□□□ -3.52
DDR2	P89113	tS(GCU)Q1	tS(GCU)Q1	86 nt		-6.93	□□□□□ -3.52
DDR2	P89113	YDR034C-A	YDR034C-A	177 nt		-6.96	□□□□□ -3.52
DDR2	P89113	YEL050W-A	YEL050W-A	192 nt		-7.01	□□□□□ -3.53
DDR2	P89113	YGR122C-A	YGR122C-A	129 nt		-7.02	□□□□□ -3.53
DDR2	P89113	YNR025C	YNR025C	360 nt		-7.12	□□□□□ -3.55
DDR2	P89113	tC(GCA)Q	tC(GCA)Q	76 nt		-7.2	□□□□□ -3.56
DDR2	P89113	YPL152W-A	YPL152W-A	99 nt		-7.46	□□□□□ -3.6
DDR2	P89113	YDL240C-A	YDL240C-A	138 nt		-7.49	□□□□□ -3.61
DDR2	P89113	YGL007C-A	YGL007C-A	87 nt		-7.7	□□□□□ -3.64
DDR2	P89113	YOR225W	YOR225W	330 nt		-7.8	□□□□□ -3.66
DDR2	P89113	YCL001W-B	YCL001W-B	255 nt		-7.83	□□□□□ -3.66
DDR2	P89113	snR64	snR64	101 nt		-7.89	□□□□□ -3.67

Retrieved 100 of 7,029 protein–RNA pairs in 85.4 ms