Protein–RNA interactions for Protein: P52593

NUP188, Nucleoporin NUP188, yeastyeast

Known RBP Predictions only

Length 1,655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP188P52593 STE18YJR086W 333 nt-4.37□□□□□ -3.11
NUP188P52593 YLR406C-AYLR406C-A 150 nt-4.38□□□□□ -3.11
NUP188P52593 YOL155W-AYOL155W-A 135 nt-4.39□□□□□ -3.11
NUP188P52593 snR34snR34 203 nt-4.45□□□□□ -3.12
NUP188P52593 YPR012WYPR012W 255 nt-4.45□□□□□ -3.12
NUP188P52593 YOR381W-AYOR381W-A 168 nt-4.49□□□□□ -3.13
NUP188P52593 YAL016C-BYAL016C-B 186 nt-4.51□□□□□ -3.13
NUP188P52593 ATP6Q0085 780 nt-4.52□□□□□ -3.13
NUP188P52593 YLR299C-AYLR299C-A 93 nt-4.52□□□□□ -3.13
NUP188P52593 YOL038C-AYOL038C-A 96 nt-4.53□□□□□ -3.13
NUP188P52593 snR80snR80 171 nt-4.54□□□□□ -3.14
NUP188P52593 snR73snR73 106 nt-4.6□□□□□ -3.15
NUP188P52593 YKL106C-AYKL106C-A 120 nt-4.63□□□□□ -3.15
NUP188P52593 YNL324WYNL324W 396 nt-4.64□□□□□ -3.15
NUP188P52593 snR60snR60 104 nt-4.64□□□□□ -3.15
NUP188P52593 snR78snR78 87 nt-4.64□□□□□ -3.15
NUP188P52593 YNL028WYNL028W 318 nt-4.66□□□□□ -3.16
NUP188P52593 snR54snR54 86 nt-4.67□□□□□ -3.16
NUP188P52593 YOR329W-AYOR329W-A 210 nt-4.7□□□□□ -3.16
NUP188P52593 YOR335W-AYOR335W-A 81 nt-4.73□□□□□ -3.17
NUP188P52593 YJL150WYJL150W 303 nt-4.73□□□□□ -3.17
NUP188P52593 YNL198CYNL198C 303 nt-4.73□□□□□ -3.17
NUP188P52593 YGL041CYGL041C 204 nt-4.78□□□□□ -3.17
NUP188P52593 YMR001C-AYMR001C-A 231 nt-4.79□□□□□ -3.18
NUP188P52593 RPL41BYDL133C-A 78 nt-4.81□□□□□ -3.18
NUP188P52593 YEL014CYEL014C 306 nt-4.84□□□□□ -3.18
NUP188P52593 YER006C-AYER006C-A 318 nt-4.85□□□□□ -3.19
NUP188P52593 YDR413CYDR413C 576 nt-4.86□□□□□ -3.19
NUP188P52593 BIL1YOR304C-A 231 nt-4.9□□□□□ -3.19
NUP188P52593 YLR120W-AYLR120W-A 102 nt-4.91□□□□□ -3.2
NUP188P52593 YLR222C-AYLR222C-A 231 nt-4.95□□□□□ -3.2
NUP188P52593 YLR434CYLR434C 384 nt-4.99□□□□□ -3.21
NUP188P52593 Q0255Q0255 1419 nt-5.03□□□□□ -3.21
NUP188P52593 YBR109W-AYBR109W-A 225 nt-5.05□□□□□ -3.22
NUP188P52593 YOR102WYOR102W 351 nt-5.06□□□□□ -3.22
NUP188P52593 snR87snR87 109 nt-5.12□□□□□ -3.23
NUP188P52593 HTL1YCR020W-B 237 nt-5.15□□□□□ -3.23
NUP188P52593 tW(UCA)QtW(UCA)Q 74 nt-5.15□□□□□ -3.23
NUP188P52593 RPL41AYDL184C 78 nt-5.23□□□□□ -3.25
NUP188P52593 YGR035CYGR035C 351 nt-5.27□□□□□ -3.25
NUP188P52593 YBR296C-AYBR296C-A 120 nt-5.31□□□□□ -3.26
NUP188P52593 YKL118WYKL118W 312 nt-5.34□□□□□ -3.26
NUP188P52593 snR38snR38 95 nt-5.34□□□□□ -3.26
NUP188P52593 YDR406W-AYDR406W-A 246 nt-5.34□□□□□ -3.26
NUP188P52593 YGL188C-AYGL188C-A 141 nt-5.37□□□□□ -3.27
NUP188P52593 YAL066WYAL066W 309 nt-5.37□□□□□ -3.27
NUP188P52593 YBR131C-AYBR131C-A 90 nt-5.39□□□□□ -3.27
NUP188P52593 snR48snR48 113 nt-5.39□□□□□ -3.27
NUP188P52593 YLR412C-AYLR412C-A 207 nt-5.42□□□□□ -3.28
NUP188P52593 YNL097C-BYNL097C-B 123 nt-5.45□□□□□ -3.28
NUP188P52593 snR56snR56 88 nt-5.5□□□□□ -3.29
NUP188P52593 GIM4YEL003W 336 nt-5.5□□□□□ -3.29
NUP188P52593 tF(GAA)QtF(GAA)Q 75 nt-5.53□□□□□ -3.3
NUP188P52593 snR85snR85 171 nt-5.56□□□□□ -3.3
NUP188P52593 tL(UAA)QtL(UAA)Q 85 nt-5.58□□□□□ -3.3
NUP188P52593 tV(UAC)QtV(UAC)Q 76 nt-5.59□□□□□ -3.3
NUP188P52593 YAL063C-AYAL063C-A 291 nt-5.7□□□□□ -3.32
NUP188P52593 YDR183C-AYDR183C-A 258 nt-5.71□□□□□ -3.32
NUP188P52593 YNL122CYNL122C 348 nt-5.72□□□□□ -3.33
NUP188P52593 YJL047C-AYJL047C-A 135 nt-5.74□□□□□ -3.33
NUP188P52593 YDL114W-AYDL114W-A 114 nt-5.77□□□□□ -3.33
NUP188P52593 YJL136W-AYJL136W-A 84 nt-5.82□□□□□ -3.34
NUP188P52593 YPL038W-AYPL038W-A 192 nt-5.82□□□□□ -3.34
NUP188P52593 RPL39YJL189W 156 nt-5.83□□□□□ -3.34
NUP188P52593 snR58snR58 96 nt-5.86□□□□□ -3.35
NUP188P52593 YCR095W-AYCR095W-A 159 nt-5.91□□□□□ -3.36
NUP188P52593 YKL123WYKL123W 381 nt-5.94□□□□□ -3.36
NUP188P52593 YDR157WYDR157W 402 nt-5.97□□□□□ -3.36
NUP188P52593 YOL164W-AYOL164W-A 183 nt-6.07□□□□□ -3.38
NUP188P52593 YDR118W-AYDR118W-A 117 nt-6.12□□□□□ -3.39
NUP188P52593 YBL071C-BYBL071C-B 99 nt-6.14□□□□□ -3.39
NUP188P52593 snR47snR47 99 nt-6.16□□□□□ -3.4
NUP188P52593 SOM1YEL059C-A 225 nt-6.18□□□□□ -3.4
NUP188P52593 YHL015W-AYHL015W-A 84 nt-6.18□□□□□ -3.4
NUP188P52593 YKL096C-BYKL096C-B 150 nt-6.2□□□□□ -3.4
NUP188P52593 snR52snR52 92 nt-6.27□□□□□ -3.41
NUP188P52593 YBL100W-CYBL100W-C 120 nt-6.28□□□□□ -3.41
NUP188P52593 YBL053WYBL053W 375 nt-6.3□□□□□ -3.42
NUP188P52593 YOR302WYOR302W 78 nt-6.31□□□□□ -3.42
NUP188P52593 YGR151CYGR151C 336 nt-6.34□□□□□ -3.42
NUP188P52593 YLR285C-AYLR285C-A 171 nt-6.36□□□□□ -3.43
NUP188P52593 YHR175W-AYHR175W-A 150 nt-6.38□□□□□ -3.43
NUP188P52593 YKL225WYKL225W 348 nt-6.4□□□□□ -3.43
NUP188P52593 YDL159W-AYDL159W-A 132 nt-6.42□□□□□ -3.44
NUP188P52593 SPG3YDR504C 384 nt-6.45□□□□□ -3.44
NUP188P52593 YNL277W-AYNL277W-A 189 nt-6.5□□□□□ -3.45
NUP188P52593 YNL170WYNL170W 396 nt-6.6□□□□□ -3.47
NUP188P52593 YEL050W-AYEL050W-A 192 nt-6.66□□□□□ -3.48
NUP188P52593 YAL037C-AYAL037C-A 93 nt-6.66□□□□□ -3.48
NUP188P52593 tS(GCU)Q1tS(GCU)Q1 86 nt-6.7□□□□□ -3.48
NUP188P52593 YNR025CYNR025C 360 nt-6.77□□□□□ -3.49
NUP188P52593 YGR122C-AYGR122C-A 129 nt-6.84□□□□□ -3.5
NUP188P52593 YDR034C-AYDR034C-A 177 nt-6.9□□□□□ -3.51
NUP188P52593 tC(GCA)QtC(GCA)Q 76 nt-7.05□□□□□ -3.54
NUP188P52593 YDL240C-AYDL240C-A 138 nt-7.06□□□□□ -3.54
NUP188P52593 YPL152W-AYPL152W-A 99 nt-7.28□□□□□ -3.57
NUP188P52593 YGL007C-AYGL007C-A 87 nt-7.42□□□□□ -3.6
NUP188P52593 YOR225WYOR225W 330 nt-7.52□□□□□ -3.61
NUP188P52593 snR40snR40 97 nt-7.6□□□□□ -3.63
NUP188P52593 snR65snR65 100 nt-7.6□□□□□ -3.63
Retrieved 100 of 7,029 protein–RNA pairs in 38 ms