Protein–RNA interactions for Protein: P48415

SEC16, COPII coat assembly protein SEC16, yeastyeast

Known RBP Predictions only

Length 2,195 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC16P48415 YBR182C-AYBR182C-A 195 nt-1.38□□□□□ -2.63
SEC16P48415 YOR329W-AYOR329W-A 210 nt-1.38□□□□□ -2.63
SEC16P48415 snR67snR67 82 nt-1.39□□□□□ -2.63
SEC16P48415 tD(GUC)QtD(GUC)Q 75 nt-1.4□□□□□ -2.63
SEC16P48415 ATP19YOL077W-A 207 nt-1.4□□□□□ -2.63
SEC16P48415 YDR183C-AYDR183C-A 258 nt-1.42□□□□□ -2.64
SEC16P48415 tM(CAU)Q2tM(CAU)Q2 78 nt-1.42□□□□□ -2.64
SEC16P48415 YML054C-AYML054C-A 159 nt-1.42□□□□□ -2.64
SEC16P48415 YAL016C-BYAL016C-B 186 nt-1.43□□□□□ -2.64
SEC16P48415 YMR172C-AYMR172C-A 384 nt-1.44□□□□□ -2.64
SEC16P48415 YLR342W-AYLR342W-A 174 nt-1.45□□□□□ -2.64
SEC16P48415 YGL041CYGL041C 204 nt-1.47□□□□□ -2.64
SEC16P48415 YEL014CYEL014C 306 nt-1.48□□□□□ -2.65
SEC16P48415 YER181CYER181C 324 nt-1.48□□□□□ -2.65
SEC16P48415 YEL050W-AYEL050W-A 192 nt-1.49□□□□□ -2.65
SEC16P48415 YOR381W-AYOR381W-A 168 nt-1.5□□□□□ -2.65
SEC16P48415 YPR197CYPR197C 564 nt-1.51□□□□□ -2.65
SEC16P48415 YOR008C-AYOR008C-A 225 nt-1.51□□□□□ -2.65
SEC16P48415 YDR413CYDR413C 576 nt-1.52□□□□□ -2.65
SEC16P48415 YJR162CYJR162C 351 nt-1.54□□□□□ -2.66
SEC16P48415 YNL337WYNL337W 255 nt-1.54□□□□□ -2.66
SEC16P48415 YLR286W-AYLR286W-A 135 nt-1.56□□□□□ -2.66
SEC16P48415 YBR196C-AYBR196C-A 150 nt-1.56□□□□□ -2.66
SEC16P48415 YLR299C-AYLR299C-A 93 nt-1.57□□□□□ -2.66
SEC16P48415 YPL038W-AYPL038W-A 192 nt-1.57□□□□□ -2.66
SEC16P48415 YOR376W-AYOR376W-A 156 nt-1.58□□□□□ -2.66
SEC16P48415 YBR178WYBR178W 375 nt-1.58□□□□□ -2.66
SEC16P48415 YJR157WYJR157W 363 nt-1.59□□□□□ -2.66
SEC16P48415 YMR315W-AYMR315W-A 108 nt-1.59□□□□□ -2.66
SEC16P48415 YDL159C-BYDL159C-B 177 nt-1.63□□□□□ -2.67
SEC16P48415 YKL118WYKL118W 312 nt-1.64□□□□□ -2.67
SEC16P48415 YHR180C-BYHR180C-B 105 nt-1.65□□□□□ -2.67
SEC16P48415 YBR131C-AYBR131C-A 90 nt-1.65□□□□□ -2.67
SEC16P48415 YOR309CYOR309C 381 nt-1.66□□□□□ -2.68
SEC16P48415 YOR316C-AYOR316C-A 210 nt-1.68□□□□□ -2.68
SEC16P48415 tF(GAA)QtF(GAA)Q 75 nt-1.69□□□□□ -2.68
SEC16P48415 YDR157WYDR157W 402 nt-1.72□□□□□ -2.69
SEC16P48415 snR55snR55 98 nt-1.76□□□□□ -2.69
SEC16P48415 RPL39YJL189W 156 nt-1.78□□□□□ -2.69
SEC16P48415 snR48snR48 113 nt-1.78□□□□□ -2.69
SEC16P48415 YDR524W-CYDR524W-C 90 nt-1.78□□□□□ -2.69
SEC16P48415 YLR222C-AYLR222C-A 231 nt-1.81□□□□□ -2.7
SEC16P48415 YOR102WYOR102W 351 nt-1.81□□□□□ -2.7
SEC16P48415 YDR524C-AYDR524C-A 120 nt-1.82□□□□□ -2.7
SEC16P48415 YNL097C-BYNL097C-B 123 nt-1.83□□□□□ -2.7
SEC16P48415 YDL240C-AYDL240C-A 138 nt-1.84□□□□□ -2.7
SEC16P48415 tL(UAA)QtL(UAA)Q 85 nt-1.84□□□□□ -2.7
SEC16P48415 YJL150WYJL150W 303 nt-1.86□□□□□ -2.71
SEC16P48415 snR80snR80 171 nt-1.88□□□□□ -2.71
SEC16P48415 RPL41AYDL184C 78 nt-1.88□□□□□ -2.71
SEC16P48415 YNL198CYNL198C 303 nt-1.88□□□□□ -2.71
SEC16P48415 YOL083C-AYOL083C-A 141 nt-1.89□□□□□ -2.71
SEC16P48415 YGL188C-AYGL188C-A 141 nt-1.89□□□□□ -2.71
SEC16P48415 GIM4YEL003W 336 nt-1.91□□□□□ -2.72
SEC16P48415 YPR012WYPR012W 255 nt-1.92□□□□□ -2.72
SEC16P48415 YHL015W-AYHL015W-A 84 nt-1.92□□□□□ -2.72
SEC16P48415 YNL277W-AYNL277W-A 189 nt-1.92□□□□□ -2.72
SEC16P48415 Q0017Q0017 162 nt-1.93□□□□□ -2.72
SEC16P48415 YOR302WYOR302W 78 nt-1.95□□□□□ -2.72
SEC16P48415 YOL155W-AYOL155W-A 135 nt-1.95□□□□□ -2.72
SEC16P48415 YKL106C-AYKL106C-A 120 nt-1.98□□□□□ -2.73
SEC16P48415 snR52snR52 92 nt-2.03□□□□□ -2.74
SEC16P48415 YOR335W-AYOR335W-A 81 nt-2.04□□□□□ -2.74
SEC16P48415 YBR296C-AYBR296C-A 120 nt-2.05□□□□□ -2.74
SEC16P48415 YDR118W-AYDR118W-A 117 nt-2.05□□□□□ -2.74
SEC16P48415 YPL152W-AYPL152W-A 99 nt-2.11□□□□□ -2.75
SEC16P48415 snR65snR65 100 nt-2.12□□□□□ -2.75
SEC16P48415 snR38snR38 95 nt-2.12□□□□□ -2.75
SEC16P48415 snR56snR56 88 nt-2.12□□□□□ -2.75
SEC16P48415 snR6snR6 112 nt-2.13□□□□□ -2.75
SEC16P48415 snR73snR73 106 nt-2.14□□□□□ -2.75
SEC16P48415 YCR095W-AYCR095W-A 159 nt-2.16□□□□□ -2.76
SEC16P48415 SOM1YEL059C-A 225 nt-2.17□□□□□ -2.76
SEC16P48415 VAR1Q0140 1197 nt-2.19□□□□□ -2.76
SEC16P48415 RPL41BYDL133C-A 78 nt-2.19□□□□□ -2.76
SEC16P48415 YBR109W-AYBR109W-A 225 nt-2.2□□□□□ -2.76
SEC16P48415 YDR406W-AYDR406W-A 246 nt-2.22□□□□□ -2.76
SEC16P48415 YBL071C-BYBL071C-B 99 nt-2.35□□□□□ -2.79
SEC16P48415 YGR151CYGR151C 336 nt-2.37□□□□□ -2.79
SEC16P48415 tV(UAC)QtV(UAC)Q 76 nt-2.37□□□□□ -2.79
SEC16P48415 YOL164W-AYOL164W-A 183 nt-2.43□□□□□ -2.8
SEC16P48415 YBL053WYBL053W 375 nt-2.46□□□□□ -2.8
SEC16P48415 YDL114W-AYDL114W-A 114 nt-2.46□□□□□ -2.8
SEC16P48415 snR47snR47 99 nt-2.47□□□□□ -2.81
SEC16P48415 snR87snR87 109 nt-2.5□□□□□ -2.81
SEC16P48415 snR85snR85 171 nt-2.52□□□□□ -2.81
SEC16P48415 YAL037C-AYAL037C-A 93 nt-2.54□□□□□ -2.82
SEC16P48415 YBL100W-CYBL100W-C 120 nt-2.58□□□□□ -2.82
SEC16P48415 YOR231C-AYOR231C-A 201 nt-2.61□□□□□ -2.83
SEC16P48415 SPG3YDR504C 384 nt-2.63□□□□□ -2.83
SEC16P48415 YHR175W-AYHR175W-A 150 nt-2.63□□□□□ -2.83
SEC16P48415 snR58snR58 96 nt-2.63□□□□□ -2.83
SEC16P48415 YKL225WYKL225W 348 nt-2.66□□□□□ -2.83
SEC16P48415 YGR122C-AYGR122C-A 129 nt-2.68□□□□□ -2.84
SEC16P48415 tS(GCU)Q1tS(GCU)Q1 86 nt-2.68□□□□□ -2.84
SEC16P48415 YMR046W-AYMR046W-A 129 nt-2.76□□□□□ -2.85
SEC16P48415 YJL136W-AYJL136W-A 84 nt-2.77□□□□□ -2.85
SEC16P48415 YDL159W-AYDL159W-A 132 nt-2.78□□□□□ -2.86
SEC16P48415 YCL001W-BYCL001W-B 255 nt-2.79□□□□□ -2.86
SEC16P48415 tR(ACG)Q2tR(ACG)Q2 74 nt-2.87□□□□□ -2.87
Retrieved 100 of 7,029 protein–RNA pairs in 23.9 ms