Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdkn1aP39689 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdkn1aP39689 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkn1aP39689 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.19□□□□□ -0.14
Cdkn1aP39689 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkn1aP39689 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.19□□□□□ -0.14
Cdkn1aP39689 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdkn1aP39689 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.18□□□□□ -0.14
Cdkn1aP39689 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkn1aP39689 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.17□□□□□ -0.14
Cdkn1aP39689 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cdkn1aP39689 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Gm23634-201ENSMUST00000175071 91 ntBASIC14.17□□□□□ -0.14
Cdkn1aP39689 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdkn1aP39689 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkn1aP39689 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.16□□□□□ -0.14
Cdkn1aP39689 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdkn1aP39689 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdkn1aP39689 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms