Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NFKB1P19838 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.28■□□□□ 0.84
NFKB1P19838 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
NFKB1P19838 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB1P19838 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB1P19838 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB1P19838 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB1P19838 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NFKB1P19838 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.28■□□□□ 0.84
NFKB1P19838 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.28■□□□□ 0.84
NFKB1P19838 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
NFKB1P19838 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.28■□□□□ 0.84
NFKB1P19838 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.28■□□□□ 0.84
NFKB1P19838 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.28■□□□□ 0.84
NFKB1P19838 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.28■□□□□ 0.84
NFKB1P19838 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.28■□□□□ 0.84
NFKB1P19838 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.28■□□□□ 0.84
NFKB1P19838 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.28■□□□□ 0.84
NFKB1P19838 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.28■□□□□ 0.84
NFKB1P19838 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.28■□□□□ 0.84
NFKB1P19838 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.28■□□□□ 0.84
NFKB1P19838 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB1P19838 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NFKB1P19838 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.27■□□□□ 0.84
NFKB1P19838 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NFKB1P19838 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.27■□□□□ 0.84
NFKB1P19838 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 MIR4758-201ENST00000577688 71 ntBASIC20.27■□□□□ 0.84
NFKB1P19838 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.27■□□□□ 0.84
NFKB1P19838 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB1P19838 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
NFKB1P19838 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.27■□□□□ 0.83
NFKB1P19838 AC125437.2-201ENST00000625180 2167 ntBASIC20.27■□□□□ 0.83
NFKB1P19838 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NFKB1P19838 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKB1P19838 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NFKB1P19838 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NFKB1P19838 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKB1P19838 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.26■□□□□ 0.83
NFKB1P19838 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
NFKB1P19838 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 TMEM179-206ENST00000616017 1645 ntBASIC20.26■□□□□ 0.83
NFKB1P19838 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.26■□□□□ 0.83
NFKB1P19838 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.26■□□□□ 0.83
NFKB1P19838 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB1P19838 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB1P19838 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
NFKB1P19838 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB1P19838 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NFKB1P19838 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB1P19838 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NFKB1P19838 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.25■□□□□ 0.83
NFKB1P19838 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.25■□□□□ 0.83
NFKB1P19838 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKB1P19838 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB1P19838 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKB1P19838 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.25■□□□□ 0.83
NFKB1P19838 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NFKB1P19838 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB1P19838 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NFKB1P19838 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKB1P19838 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKB1P19838 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB1P19838 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.25■□□□□ 0.83
NFKB1P19838 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKB1P19838 AC104771.1-201ENST00000603335 964 ntBASIC20.25■□□□□ 0.83
NFKB1P19838 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB1P19838 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NFKB1P19838 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKB1P19838 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB1P19838 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB1P19838 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB1P19838 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKB1P19838 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms