Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LAMP1P11279 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LAMP1P11279 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LAMP1P11279 AC010980.2-201ENST00000587099 1412 ntBASIC18.89■□□□□ 0.61
LAMP1P11279 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LAMP1P11279 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LAMP1P11279 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.89■□□□□ 0.61
LAMP1P11279 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LAMP1P11279 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.89■□□□□ 0.61
LAMP1P11279 TREX1-205ENST00000625293 1783 ntBASIC18.88■□□□□ 0.61
LAMP1P11279 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LAMP1P11279 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.88■□□□□ 0.61
LAMP1P11279 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LAMP1P11279 AC004911.1-201ENST00000416316 871 ntBASIC18.88■□□□□ 0.61
LAMP1P11279 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.88■□□□□ 0.61
LAMP1P11279 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.88■□□□□ 0.61
LAMP1P11279 OR10C1-204ENST00000622521 1039 ntBASIC18.88■□□□□ 0.61
LAMP1P11279 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.88■□□□□ 0.61
LAMP1P11279 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LAMP1P11279 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LAMP1P11279 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LAMP1P11279 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LAMP1P11279 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.88■□□□□ 0.61
LAMP1P11279 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LAMP1P11279 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LAMP1P11279 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LAMP1P11279 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LAMP1P11279 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LAMP1P11279 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LAMP1P11279 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
LAMP1P11279 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LAMP1P11279 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LAMP1P11279 KRT8P20-201ENST00000423953 1409 ntBASIC18.87■□□□□ 0.61
LAMP1P11279 AC093787.1-201ENST00000450396 207 ntBASIC18.87■□□□□ 0.61
LAMP1P11279 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.87■□□□□ 0.61
LAMP1P11279 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
LAMP1P11279 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LAMP1P11279 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.86■□□□□ 0.61
LAMP1P11279 AC009237.14-201ENST00000609975 1594 ntBASIC18.86■□□□□ 0.61
LAMP1P11279 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LAMP1P11279 KRT16P6-202ENST00000425692 1426 ntBASIC18.86■□□□□ 0.61
LAMP1P11279 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LAMP1P11279 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LAMP1P11279 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LAMP1P11279 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LAMP1P11279 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.86■□□□□ 0.61
LAMP1P11279 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LAMP1P11279 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
LAMP1P11279 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.86■□□□□ 0.61
LAMP1P11279 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LAMP1P11279 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LAMP1P11279 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
LAMP1P11279 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LAMP1P11279 KRT17P1-201ENST00000399211 1546 ntBASIC18.85■□□□□ 0.61
LAMP1P11279 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LAMP1P11279 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.85■□□□□ 0.61
LAMP1P11279 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LAMP1P11279 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.85■□□□□ 0.61
LAMP1P11279 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.85■□□□□ 0.61
LAMP1P11279 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.85■□□□□ 0.61
LAMP1P11279 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.85■□□□□ 0.61
LAMP1P11279 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.85■□□□□ 0.61
LAMP1P11279 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.85■□□□□ 0.61
LAMP1P11279 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.85■□□□□ 0.61
LAMP1P11279 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.85■□□□□ 0.61
LAMP1P11279 AC005181.1-201ENST00000604782 1256 ntBASIC18.85■□□□□ 0.61
LAMP1P11279 AL589743.5-201ENST00000616611 1050 ntBASIC18.85■□□□□ 0.61
LAMP1P11279 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.85■□□□□ 0.61
LAMP1P11279 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.85■□□□□ 0.61
LAMP1P11279 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LAMP1P11279 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LAMP1P11279 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LAMP1P11279 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LAMP1P11279 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LAMP1P11279 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.84■□□□□ 0.61
LAMP1P11279 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LAMP1P11279 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.84■□□□□ 0.61
LAMP1P11279 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.84■□□□□ 0.61
LAMP1P11279 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LAMP1P11279 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms