Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA1P02708 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA1P02708 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRNA1P02708 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
CHRNA1P02708 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRNA1P02708 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRNA1P02708 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRNA1P02708 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.79■■□□□ 1.08
CHRNA1P02708 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA1P02708 MIR6786-201ENST00000616843 113 ntBASIC21.79■■□□□ 1.08
CHRNA1P02708 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CHRNA1P02708 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CHRNA1P02708 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.79■■□□□ 1.08
CHRNA1P02708 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRNA1P02708 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA1P02708 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHRNA1P02708 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA1P02708 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CHRNA1P02708 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CHRNA1P02708 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA1P02708 MIR1238-201ENST00000408483 83 ntBASIC21.78■■□□□ 1.08
CHRNA1P02708 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.78■■□□□ 1.08
CHRNA1P02708 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRNA1P02708 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRNA1P02708 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.78■■□□□ 1.08
CHRNA1P02708 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA1P02708 RN7SL850P-201ENST00000579959 291 ntBASIC21.78■■□□□ 1.08
CHRNA1P02708 AC145285.6-201ENST00000604632 637 ntBASIC21.78■■□□□ 1.08
CHRNA1P02708 AC026310.3-201ENST00000625186 2373 ntBASIC21.78■■□□□ 1.08
CHRNA1P02708 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA1P02708 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA1P02708 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA1P02708 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CHRNA1P02708 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA1P02708 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA1P02708 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CHRNA1P02708 CLDN5-201ENST00000403084 2357 ntBASIC21.77■■□□□ 1.08
CHRNA1P02708 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA1P02708 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA1P02708 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA1P02708 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA1P02708 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA1P02708 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.77■■□□□ 1.08
CHRNA1P02708 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.77■■□□□ 1.08
CHRNA1P02708 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.77■■□□□ 1.08
CHRNA1P02708 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.77■■□□□ 1.08
CHRNA1P02708 AC007225.1-201ENST00000566331 1836 ntBASIC21.77■■□□□ 1.08
CHRNA1P02708 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA1P02708 KRT16P1-201ENST00000399124 1418 ntBASIC21.77■■□□□ 1.08
CHRNA1P02708 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.77■■□□□ 1.08
CHRNA1P02708 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CHRNA1P02708 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.77■■□□□ 1.07
CHRNA1P02708 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHRNA1P02708 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.76■■□□□ 1.07
CHRNA1P02708 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.76■■□□□ 1.07
CHRNA1P02708 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
CHRNA1P02708 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA1P02708 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA1P02708 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA1P02708 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA1P02708 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.76■■□□□ 1.07
CHRNA1P02708 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.76■■□□□ 1.07
CHRNA1P02708 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.76■■□□□ 1.07
CHRNA1P02708 TMPOP1-202ENST00000424642 1267 ntBASIC21.76■■□□□ 1.07
CHRNA1P02708 AL390955.1-201ENST00000428694 934 ntBASIC21.76■■□□□ 1.07
CHRNA1P02708 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.76■■□□□ 1.07
CHRNA1P02708 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA1P02708 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.76■■□□□ 1.07
CHRNA1P02708 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.76■■□□□ 1.07
CHRNA1P02708 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.76■■□□□ 1.07
CHRNA1P02708 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
CHRNA1P02708 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA1P02708 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA1P02708 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.76■■□□□ 1.07
CHRNA1P02708 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHRNA1P02708 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA1P02708 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA1P02708 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA1P02708 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA1P02708 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA1P02708 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHRNA1P02708 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.75■■□□□ 1.07
CHRNA1P02708 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.75■■□□□ 1.07
CHRNA1P02708 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.75■■□□□ 1.07
CHRNA1P02708 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA1P02708 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA1P02708 CYP2D8P-201ENST00000433633 1490 ntBASIC21.75■■□□□ 1.07
CHRNA1P02708 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA1P02708 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA1P02708 AP006587.1-201ENST00000534129 1502 ntBASIC21.75■■□□□ 1.07
CHRNA1P02708 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA1P02708 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.75■■□□□ 1.07
CHRNA1P02708 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHRNA1P02708 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA1P02708 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA1P02708 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CHRNA1P02708 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA1P02708 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.74■■□□□ 1.07
CHRNA1P02708 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.74■■□□□ 1.07
CHRNA1P02708 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms